Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq54669 147 3e-30 >seq54669 Length=12211 Score = 147 bits (162), Expect = 3e-30 Identities = 302/446 (68%), Gaps = 5/446 (1%) Strand=Plus/Plus Query 43566 GAACGTC---TGGACTAAAGAGCGTGATATAGTCGTCATTTTTCAGACGCTCGAAAAACA 43622 ||||||| ||||||||| || || || | |||| ||| | ||||| | | | Sbjct 11767 GAACGTCAGATGGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAA 11826 Query 43623 GCTTGTTGATTTGGATACCGTAGTCAAGCTGGCGAATTCGATTTTCTTCCACGCCCTTGT 43682 || || ||||| | ||||| || | ||||||| ||||| ||||| || || || Sbjct 11827 ATTTATTAATTTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGT 11886 Query 43683 TGTTTTTCAGAACAAGGATTTTTTCAACTTCAAGATGCCACATTGGATAGTAAAGAGTAG 43742 | ||||| | || | | ||||| | || | |||||||| ||| | | | || | Sbjct 11887 TATTTTTTAATACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTG 11946 Query 43743 CAGCGCCACCGCGTACACCACCCTGTGAGCAACTTTTTACCGCAGTCTGGAAATATTTCC 43802 | || ||||| || ||||| || || || ||| ||||||||||||||| || | ||| Sbjct 11947 CTGCACCACCACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTAT 12006 Query 43803 AGAACGGAATAATACCAGTGTGGCGAACTTCACCACTTCGAATGCGAGAACCTTCGGCAC 43862 | ||||||||| ||| || || | |||||||| ||||| | | ||||| |||| Sbjct 12007 AAAACGGAATACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCAC 12066 Query 43863 GAATAGCG-CCACCGTTGATACCGATACCAGCGCGTTTGCTAATATAGTCAACGATTGAA 43921 | || ||| ||| | || ||||| || || ||||| | || ||| | | ||||| Sbjct 12067 GGAT-GCGACCAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGCG 12125 Query 43922 CTTGCGGTAGCGTTAATGCTATCGAGTTCGTCGCCGCTTTCGATCTTCACGCATGAGCTA 43981 ||||| || || || || ||| | ||| || | ||| ||| || || |||||| Sbjct 12126 CTTGCTGTGGCATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTA 12185 Query 43982 AACTGGCGAGTCGGGGTTCGAACACC 44007 || ||||| || || || || ||||| Sbjct 12186 AATTGGCGGGTAGGCGTACGTACACC 12211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745695227362800