Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq55467 277 6e-70 >seq55467 Length=2484 Score = 277 bits (306), Expect = 6e-70 Identities = 763/1156 (66%), Gaps = 24/1156 (2%) Strand=Plus/Plus Query 1067 AGGTGAATGCATCGAACATGAACAAACCCGAGGACGGCAGTCGCTTCGAGCCGCTGATTG 1126 |||| ||||| || ||||| ||| ||| || || || |||||||| || |||| Sbjct 1 AGGTTAATGCCTCCAACATAAACCGTCCCATCGATGGGGCCCGTTTCGAGCCACTAATTG 60 Query 1127 GCAACCCGGGCGACGGCGCGTCGCC--ATCGTGCTCCATTGTCGATGAGTACCACGAGCA 1184 ||||||| ||||| || || || || ||| ||| |||| ||||||| | ||| || || Sbjct 61 GCAACCCCGGCGATGGGGCTTCTCCTCATCTTGC--CATTATCGATGAATTCCATGAACA 118 Query 1185 CGATAGCGCCGCACTGTACGAAACGATGCTGACCGGCATGGGCGCGCGCCGGCAGCCGCT 1244 ||| | | || || | || ||| ||||||| |||||||| || | ||| ||||| Sbjct 119 CGAAAATAGCAATCTTTATCACACAATGTTGACCGGTATGGGCGCCCGGCAGCAACCGCT 178 Query 1245 CATGTTCATCATCACGACTGCGGGCGCGAACATCGAGGGGCCGTGCTTCGACAAGCGCCG 1304 || | | | ||||| || || ||||||| || || || | ||||||||||| Sbjct 179 TATCTGGAGTGTGACGACAGCCGGTAATGACATCGAAGGTCCCTGTTATGACAAGCGCCG 238 Query 1305 GCAGGTGATCGAAATGCT--CGAAGGGACGGTGCCAGACGACGAGCTTTTCGGCTGGATC 1362 | | || || || ||||| | ||| | ||||| ||||||| | || || | || Sbjct 239 GGAAGTCATTGATATGCTAACCCAGGTA--GTGCCCAACGACGAATTATTTGGGTTAATT 296 Query 1363 TGGACGATCGACGAAGGGGACGATTGGACCGATCCGCGCGTGCTGGCGAAAGCCAATCCG 1422 | || |||| || || || ||||||||| | || || || ||||||||||| Sbjct 297 TACACCCTCGATGAGGGAGAGGATTGGACCCAGCCAGCCGCCCTCAGCAAAGCCAATCCC 356 Query 1423 AATATCGGAATCTCGGTCTATCAGGACTATCTGGAAAGCCAGCAGCAGCGTGCGATTAAG 1482 || || || |||| | || | || | |||| |||||| || || || || || || Sbjct 357 AACATGGGCGTCTCTATTTACCCTGATTTTCTGCTAAGCCAACAACAACGAGCCATCAAC 416 Query 1483 TCTGCGCGCTTCACGAACACGTTCAAGACGAAGCACTTGAACGTCTGGACGTCGGCCAAG 1542 ||| | | ||| | || || || || ||| | || ||||| ||| | || | Sbjct 417 AATGCCAGACAAGCCAACGCCTTTAAAACCAAACACCTCAATATCTGGGTGTCAG-CACG 475 Query 1543 GCGGGCTAT-TTCAACCTCGAAGACTGGAAATCATGCGAAGAC-CGATCGCTGACCCTTG 1600 |||| | |||||| | | ||||| | || |||||| | | | ||||| | | Sbjct 476 TTCGGCTTTCTTCAACATGGTGAACTGGCGCGCTTGTGAAGACACCAGC-CTGACTTTGG 534 Query 1601 AGCAGTTCGAGGGGCAAGATTGCGTGCTCGCGCTCGACATGGCGCGCAAGCTCGATTTGA 1660 | || ||||| || |||| || | | | | || ||||||||||||| ||| ||| Sbjct 535 ATCAATTCGAAGGACAAGCCTGTTATTTAGGGTTTGATTTGGCGCGCAAGCTAGATATGA 594 Query 1661 ACAGTATGGCCCGGCTTTTCTGGCACGACATCGACGGGCGGCGGCATTACTTCTGCGTTG 1720 | || |||||||| | || | || || |||| || ||||| | | | ||| Sbjct 595 ATAGCATGGCCCGCGTGTTTATCCGTGAGATTAACGGAAAACGTCATTATTACAGTATTG 654 Query 1721 CGCCGCGATTCTGGGTGCCCGAAGAAACTGTGCGCA------ATACCGAAAACCGTCGTA 1774 | || | ||||||||||| | || | ||| || ||||| | | ||||| | Sbjct 655 CCCCTAGGTTCTGGGTGCCTTACGACAGCGTGTACAGTGCAGATACCAACGATCGTCGCA 714 Query 1775 TGGCGGAGCGATATCAGGCGTGGGTCAATCAGGGCTGTTTGCTCGAAACGGATGGCGCGG 1834 ||||| |||| ||| |||||||||| | | | ||| || || || || | Sbjct 715 CAGCGGAACGATTTCAAAAGTGGGTCAATATGCACCAGCTAATCGCGACCGACGGGGCAG 774 Query 1835 AGATCGACTATCGCGACATTCTCGAGGAGGCGAAGGATGCGAACCGGTTGTGTCCGGTGC 1894 | | ||||| || | || ||||| || || |||| || ||| | | ||||| Sbjct 775 AAGTTGACTACCGGTATATCCTCGAAGAAGCAAAGGCCGCTAACTGTCTTAACCCGGT-- 832 Query 1895 AATGCACTC--CGCTCGACCCGCACGGCGCAACGAACCTGTCGCACCAGCTCGAGGACGA 1952 |||| || || |||| || || ||||| || |||| || ||| | | ||||| Sbjct 833 CGTGCAATCAGCGATCGATCCTCATGGCGCCACTGGCCTGAGTCATCAGTTGGCCGACGA 892 Query 1953 AGGGCTGACGCCGGTCACGATCGTGCAGAACTACACGAACATGTCGGACCCAATGAAGGA 2012 || | || ||||| || | || || |||||| | ||||| || | ||||| || Sbjct 893 GCAACTTAACCCTGTCACCATTATCCAAAATTACACGCATATGTCAGATGCCATGAAAGA 952 Query 2013 GCTTGAGGCGGCGATTACGGCGGGCCGATTCCATCACGACGGCAACCCGATCATGACGTG 2072 | || || || ||| | ||||| || || ||||| || |||| |||||||| || Sbjct 953 ATTGGAAGCCGCCATTGAATCTGGCCGCTTTCACCACGATGGTCACCCCATCATGACCTG 1012 Query 2073 GTGTGTCAGCAACGTCATCGGCAAGAACCTGCCGGGAAATGACGATGTGGTGCGCCCGAT 2132 ||| |||||||||| | || || | ||||||| || || || | || |||||||| Sbjct 1013 GTGCATCAGCAACGTGGTGGGTAAACATGTGCCGGGTAACGATGACATTGTTCGCCCGAT 1072 Query 2133 -CAAGCAGGGCAACGACAACAAGATTGACGGTGCTGTCGCACTAATCATGGCGATAGGCC 2191 ||| | | || || ||||| |||||||| || |||||| |||||||||| | || | Sbjct 1073 AAAAGAACAGGAA-GAAAACAAAATTGACGGCGCCGTCGCATTAATCATGGCAGTTGGTC 1131 Query 2192 GCGCCATGCTTGAAAA 2207 | || |||||| |||| Sbjct 1132 GGGCAATGCTTCAAAA 1147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175329009362030