Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq669 91.5 1e-13 >seq669 Length=42814 Score = 91.5 bits (100), Expect = 1e-13 Identities = 169/244 (69%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 48485 CAAAGACAGTCAAAA-CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTG 48543 |||||||| |||| ||||| | ||| | | || ||||| || || |||||| || Sbjct 31599 CAAAGACATTCAATTTCCTCCTCTCAAACGAAGAACCAAATGGAGAGTCGACTCCTTCTG 31658 Query 48544 AATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAAC 48602 |||||||||||||| | | || || ||||||| | ||| || || | | || | | Sbjct 31659 AATGTTGTAATCAGAGAGAGTG-CGGCCGTCCTCTAACTGTTTGCCCGCAAAGATAAGTC 31717 Query 48603 GCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGG 48662 ||| |||||| || | || |||||||||| ||| || ||| | | |||| Sbjct 31718 TCTGTTGATCCGGAGGAATACCTTCCTTGTCCTGAATCTTTGCCTTCACGTTTTCGATGG 31777 Query 48663 TATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCT 48722 |||| | || |||| || | || ||||| || |||||||| || ||||| || |||| Sbjct 31778 TATCCGAAGCCTCCACTTCCAAAGTAATGGTCTTTCCGGTGAGGGTCTTCACGAATATCT 31837 Query 48723 GCAT 48726 |||| Sbjct 31838 GCAT 31841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420961924826345