Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq9107 423 1e-113 seq13154 170 1e-37 seq11509 82.4 5e-11 >seq9107 Length=87930 Score = 423 bits (468), Expect = 1e-113 Identities = 887/1314 (68%), Gaps = 16/1314 (1%) Strand=Plus/Minus Query 71337 GCAGAACAAGCTGTACTTGGTGGCTTAATGCTTGATAACTGCCGCTGGGATGAAGTTGCA 71396 |||||||| ||||| | ||||| || ||| | ||||| || |||||| || Sbjct 50092 GCAGAACAGTCTGTATTGGGTGGATTGATGTTAGATAATGAGCGTTGGGATAGCGTCTTT 50033 Query 71397 GATCGTATAGTTGCTGATGATTTTTATACCAGTGCTCATCGTGAAATTTTCAGTGAGATG 71456 || || || | ||||||||| || | | | ||||| ||||| | ||||||| Sbjct 50032 GAACGCGTAACGAGTCATGATTTTTTTAGCCGCCCCCATCGCCGGATTTTTATTGAGATG 49973 Query 71457 GAGAGGTTATT--AAGTCATGGCAAACCGATTGATTTGATAACACTTGCTGAAGCACTTG 71514 || | ||| ||| | ||||| |||||| | || || | | ||| |||| | Sbjct 49972 CAGTGTCTATCGGAAGCAAAT--AAACCTATTGATCTTATTACCTTATCAGAATCACTAG 49915 Query 71515 AACAGAACGGTAAATTAGAACGCGCCGGTGGTTTTGCGTACCTTGCGGAGATGTCAAAGA 71574 ||||||| || ||||| | || || ||||| || | || ||| | || || | Sbjct 49914 AACAGAAAGGGCTCTTAGATTCGGTAGGGGGATTTGCATATTTAGCTGAGCTATCTAAAA 49855 Query 71575 ACACGCCCAGCTCGGCAAATATTTGTGCTTATGCGGATATCGTTCGTGAACGCGCGGTTG 71634 |||| || ||| | ||||| ||| ||||||||| ||||| || |||||||| || || | Sbjct 49854 ACACCCCTAGCGCTGCAAACATTAATGCTTATGCAGATATAGTCCGTGAACGAGCAGTGG 49795 Query 71635 TTCGTGAAATGATTTCCGTCGCAAATGAAATAGCCGAAGCTGGATA---TGCGCAGGATG 71691 | | |||||||| || || || || |||| || || ||||| || | | |||| Sbjct 49794 TCAGGGAAATGATCTCGGTTGCTAACAAAATTGCTGATGCTGGTTACAATCCACAGGGAC 49735 Query 71692 GCAGGGGCAGCAATGAATTGCTGGATATGGCCGAGCGCCGCGTTTTTGAAATAGCTGAAA 71751 |||| ||| | || || | || ||||||| | || ||| ||||||| |||| Sbjct 49734 GCAGT---AGCGAAGATTTATTAGACTTGGCCGAATCACTGGTATTTCAAATAGCAGAAA 49678 Query 71752 AACGAC--AAAAGAGCGGTAGTGGTCCAAAAGATATCGCCAGCATTCTCGATGCAACGGT 71809 || || | |||| ||| | |||||| ||| | ||| | || | || | Sbjct 49677 GTAGAACTAATAAAGCGATAGGG--CCAAAAAGTATTGAATACATCTTAGAAGACACCAT 49620 Query 71810 ATCTCGCATAGAAGAGTTGTTTCAG-CGACCACATGATGGTGTAACGGGGCTTGATACGG 71868 | ||||| ||||| | || ||| || ||| || | | ||||| ||| | ||| | Sbjct 49619 GACGCGCATTGAAGAACT-TTACAGACGGCCAGATAAAGAGGTAACCGGGGTATCTACCG 49561 Query 71869 GATTTACCGATCTCAATAAGAAGACGGCAGGGCTTCAGCCGTCCGATCTCATCATTGTCG 71928 | | | || | |||| || || || || | || || ||| | |||||||||| Sbjct 49560 GTTATCAGGACTTAGATAAAAAAACAGCGGGTTTGCAAAAATCGGATTTGATCATTGTCG 49501 Query 71929 CCGCCCGCCCATCTATGGGGAAGACCACGTTTGCGATGAATCTCGTCGAAAATGCCGCAG 71988 | || || || || ||||| || || || ||||| |||||||| |||||||||||| Sbjct 49500 CTGCTCGTCCTTCCATGGGTAAAACTACTTTTGCTATGAATCTATGCGAAAATGCCGCCA 49441 Query 71989 TTCGTAACGATAAGCCCGTATTGGTTTTTAGCCTTGAGATGCCGAGCCACCAGCTGATGA 72048 | | || || || || || | || || | || ||||| || |||||||||| Sbjct 49440 TGATGCAGGAAAAACCTGTGTTAATATTCAGTTTAGAAATGCCTGCTCATCAGCTGATGA 49381 Query 72049 TGCGCTCACTGGCTTCTCTTGCACGCGTTGATCAGACTCGTATTCGGACAGGGCAACTTA 72108 |||| ||||| || || |||| | ||||| || ||||| || || || ||| | Sbjct 49380 TGCGAATGCTGGCATCGCTATCACGAATAGATCAAACGCGTATCCGTACTGGCCAATTAG 49321 Query 72109 ACGACGAGGATTGGGCGCGGGTTTCTGGCGCAATGGGTATTCTGTTGGACAAGCAGAATA 72168 ||| || || ||||| || |||| | | ||||| || || | || | | |||| Sbjct 49320 GCGATGAAGACTGGGCACGTATTTCCAGTTCGATGGGGATACTACTTGAAAGACGCAATA 49261 Query 72169 TTTTTATTGATGACTCAAGCGCCCTGACGCCGACAGAGCTACGTTCCCGCGCTCGTCGTG 72228 | | |||||| || ||| | | |||| || | ||| | || ||||| ||||| || | Sbjct 49260 TGTATATTGACGATTCATCCACGTTGACACCAATAGATGTGCGCTCCCGTGCTCGACGAG 49201 Query 72229 TTTATAAAGAAAATGGTGGTTTGAGCATGATTATGATCGACTACCTGCAACTTATGCGCG 72288 ||| | ||||| ||||| || || ||||| |||| || || | ||||| || || | Sbjct 49200 TTTTTCGTGAAAACGGTGGCTTAAGTTTGATTTTGATAGATTATTTACAACTCATACGGG 49141 Query 72289 TCCCCGAGCTGCAAGATAACCGAACGCTGGAAATTGCCGAGATTTCTCGCTCACTGAAGG 72348 | || | | ||||||||||| || ||||| | || |||||||| ||| | || | Sbjct 49140 TTCCGGCATTAATGGATAACCGAACACTAGAAATCGGTGAAATTTCTCGATCATTAAAAG 49081 Query 72349 CGTTGGCGAAGGAATTACAAGTACCGGTGGTGGCATTGTCACAACTTAATCGATCGCTTG 72408 | ||||||| ||| || ||||||| || || || | || || |||||||| || | Sbjct 49080 CACTGGCGAAAGAACTAGAAGTACCAGTAGTAGCCATTTCCCAGCTTAATCGCGGCCTGG 49021 Query 72409 AACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGC 72468 |||| ||||| ||||| || || | ||||| |||||||| ||||| || | ||||| | Sbjct 49020 AACAACGTGCAGACAAGCGTCCAATTAATTCCGATTTACGAGAATCCGGCTCTATTGAAC 48961 Query 72469 AGGACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTTATCACCCGGATAGCGAAA 72528 | || || || || ||||||||| | ||| | |||||||| || || |||||||| | Sbjct 48960 AAGATGCTGATCTTATTATGTTTATTTATAGAGACGAAGTGTACCATGAAGATAGCGATA 48901 Query 72529 TGAAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAAATGGCCCAATTGGCACGGTGA 72588 || ||||| || || | ||| | || || ||||| ||||| || |||||||||||| Sbjct 48900 AAAAAGGCATCGCAGAAATTATTTTAGGTAAACAACGTAATGGTCCGATTGGCACGGTGC 48841 Query 72589 GATTGGCTTTTAACGGCCAATACTCACGGTTTGATAACTATGCCGGTGCTGACT 72642 ||||| | |||||| | |||| || || || || || |||||| || || ||| Sbjct 48840 GATTGACCTTTAACAGTCAATGGTCTCGATTCGACAATTATGCCAGTCCTAACT 48787 >seq13154 Length=83798 Score = 170 bits (188), Expect = 1e-37 Identities = 242/334 (72%), Gaps = 6/334 (2%) Strand=Plus/Minus Query 21069 AACAAAGTCATCCTGATTGGTACCCTGGGGCAAGACCCGGAGATCAGGTATATACCAAAT 21128 || |||||| | ||||||| | | | || || || || || || | ||||| ||||| Sbjct 29624 AATAAAGTCCTTTTGATTGGGAACTTAGGTCAGGATCCAGAAATTCGTTATATGCCAAAC 29565 Query 21129 GGCGGCGCGGTCGG-AAGA-CTCAGCATCGCAACGAATGAATCATGGCGCGACAAGCAAA 21186 || || || || | || | ||| | | ||||||| |||| |||||||| || |||| Sbjct 29564 GGGGGGGCTGTTGCCAACATCTCTG--TGGCAACGACTGAAAGCTGGCGCGATAAACAAA 29507 Query 21187 CGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTTGTTCGGAAAACTTGCTG 21246 | ||| ||| || ||| | |||||||||||| |||||||||||||| ||| | |||| Sbjct 29506 CTGGCGAACCAAAGGAGAAGACAGAATGGCATCGTGTCGTTTTGTTCGGTAAAATAGCTG 29447 Query 21247 AAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACATCGAAGGGAAACTTA-AA 21305 || | || | || ||||| ||||| || || ||||| || |||||||||| |||| || Sbjct 29446 AAGTGGCAAAAGAATATTTGCGAAAGGGATCGCAGGTTTATATCGAAGGGAC-CTTACAA 29388 Query 21306 ACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGACGGAAATTATCGTCAGC 21365 || || || ||| |||| | |||| || || ||||| || ||| | |||||| Sbjct 29387 ACACGCAAATGGCAAGATCAAAACGGTCAGGATCGCTACACAACTGAAGTGGTCGTCAAT 29328 Query 21366 CAGGGCGGCACCATGCAAATGATCGGCGCTCGCC 21399 | || ||||||||||||||| | || | ||||| Sbjct 29327 CTAGGAGGCACCATGCAAATGCTAGGGGGTCGCC 29294 >seq11509 Length=51200 Score = 82.4 bits (90), Expect = 5e-11 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 70933 GGCCCTTTAGCTCAGT-GGTTAGAGCTGGCGACTCATAATCGCACGGTCACCGGTTCAAG 70991 ||||| |||||||||| ||||||||| ||||||||||||||| |||| | ||||| | Sbjct 31927 GGCCCCTTAGCTCAGTTGGTTAGAGCAAGCGACTCATAATCGCTGGGTCGCTGGTTCGAA 31986 Query 70992 TCCGGTAGGGGCCACC-ATATT 71012 ||| | |||||||||| ||||| Sbjct 31987 TCCAGCAGGGGCCACCAATATT 32008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303026966966745