Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq13088 86.0 3e-12 seq381 86.0 3e-12 seq24000 82.4 4e-11 >seq13088 Length=1961 Score = 86.0 bits (94), Expect = 3e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| ||| |||||||||| |||| | ||||||||||||||| |||||| |||||| Sbjct 1513 TGGCCCGTGAGGGGATCGAACCCGCGACTTCCGCGTTATTAGCACGGCGCTCTAACCAAC 1572 Query 11516 TGAGCTAATGGGCC 11529 |||||||| |||| Sbjct 1573 TGAGCTAACAGGCC 1586 >seq381 Length=38394 Score = 86.0 bits (94), Expect = 3e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| || |||||||||| |||| | ||||||||||||||| |||||| |||||| Sbjct 27524 TGGCCCGTGGGGGGATCGAACCCACGACTTCCGCGTTATTAGCACGGCGCTCTAACCAAC 27583 Query 11516 TGAGCTAATGGGCC 11529 |||||||| ||||| Sbjct 27584 TGAGCTAACGGGCC 27597 >seq24000 Length=25550 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| | ||||||||||||||| |||||| |||||||||||||| ||| Sbjct 268 GGATCGAACCCACGACTTCCGCGTTATTAGCACGGCGCTCTAACCAACTGAGCTAACGGG 209 Query 11528 CC 11529 || Sbjct 208 CC 207 Lambda K H 0.640 0.410 0.923 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261311632767220