Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq9088 161 2e-35 seq55748 127 3e-25 >seq9088 Length=19251 Score = 161 bits (178), Expect = 2e-35 Identities = 200/274 (73%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| ||||| || | | |||||| ||||||||||| || || || ||||| || || Sbjct 690 CGCTAAACGTCACCGAAAAGTTCTTCGCGATAACATCCAGGGTATAACAAAGCCTGCAAT 631 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | |||||||| || | ||||| ||||| ||| | ||||| || ||||||| |||| Sbjct 630 CAGACGTCTGGCCCGAAGAGGTGGTGTCAAACGTATTTCTGGTCTGATCTATGAGGAGAC 571 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| ||||| | |||||| ||| || ||| ||||| | |||||||| Sbjct 570 CAGAGGTGTGCTGAAGGTATTCCTCGAGAATGTGATCAGAGATGCCGTGACTTATACCGA 511 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| |||||| | |||||| | ||||| || |||||||||| || Sbjct 510 ACACGCGAAGAGGAAGACCGTCACCGCTATGGATGTGGTCTACGCTCTGAAACGTCAGGG 451 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 | | ||||||| ||||| ||||| || || Sbjct 450 AAGAACTCTTTATGGATTTGGCGGTTAAACTACT 417 >seq55748 Length=691 Score = 127 bits (140), Expect = 3e-25 Identities = 189/268 (71%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || ||||| || | | |||||| ||||||||||| || || ||||| || || || Sbjct 347 CGCCAAACGTCACCGAAAAGTTCTTCGCGATAACATCCAGGGTATTACCAAACCCGCGAT 288 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | |||||||| || | || ||||| || ||| | || || | | ||||| |||| Sbjct 287 TAGACGTCTGGCCCGAAGAGGAGGAGTGAAACGTATTTCAGGTCTTATTTATGAGGAGAC 228 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| | || | |||||| | | ||| ||| ||||| || |||||||| Sbjct 227 CAGAGGTGTCCTCAAAGTATTCCTCGAAAACGTGATCAGAGATGCGGTCACTTATACCGA 168 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||||||| | |||||| | |||||||| | |||||||| || Sbjct 167 ACACGCGAAGAGAAAGACTGTCACCGCTATGGATGTGGTCTATGCTCTCAAACGTCAGGG 108 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 107 AAGAACTCTCTATGGTTTCGGCGGTTAA 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79023683372085