Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq38498 149 6e-31 seq17432 123 2e-23 >seq38498 Length=6817 Score = 149 bits (164), Expect = 6e-31 Identities = 196/272 (72%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 || || ||||| || || | | || ||||| ||||| || ||||| ||||||||||| Sbjct 5527 GATGGCAAAATGCATGGCTTTATGCGAATGTATTGGGCAAAGAAGATACTCGAGTGGACA 5468 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836 ||||| || || ||||||||||| | ||||| | | ||||||| ||| | ||| Sbjct 5467 CAAACACCAGAACAGGCGCTCGAATTCGCTATTCTTTTGAACGATAAGTACGAATTGGAC 5408 Query 71837 GGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGA 71896 || ||||| || ||||| |||||||| || |||||| || || ||| |||||||| Sbjct 5407 GGACGCGACCCCAACGGGTATGTCGGCTGTATGTGGTCTATATGTGGTATTCACGATCAG 5348 Query 71897 AGCTTTTTAGAACGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAA 71956 | | ||| | | ||||| || |||||||| || ||||| || || || || Sbjct 5347 GGATGGGCTGAAAGGCCGGTGTTCGGCAAAATTCGTTACATGAACTACAAGGGATGTGAG 5288 Query 71957 CGCAAGTTCAATGTGAAACAATACATTATTAA 71988 |||||||| |||| || |||||||||| ||| Sbjct 5287 CGCAAGTTTGATGTCAATCAATACATTAATAA 5256 >seq17432 Length=31749 Score = 123 bits (136), Expect = 2e-23 Identities = 170/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 26760 TCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTA 26819 ||| ||||||||||| | || || ||||| || || |||||| | || ||| | || | Sbjct 23737 TCAGACAAAATGCAAATTTTCGTGAAAACGTTGACCGGAAAAACCATTACCCTTGAGGTG 23796 Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879 || | ||||||||| ||| | || || |||||| |||||||| || || ||| Sbjct 23797 GAGCCCTCCGACACCATTGAGAACGTGAAGGCCAAGATTCAGGACAAAGAGGGCATCCCT 23856 Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939 ||||| ||||| ||||| || | | ||||||||||| ||||| | | | || | Sbjct 23857 CCCGACCAACAGAGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGCACTCTCTCC 23916 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || ||||||||||| || || || | ||| |||| || | || |||||||||| Sbjct 23917 GATTACAACATTCAAAAGGAGTCAACCCTTCATTTGGTACTCCGTCTGAGAGGAGGAA 23974 Score = 118 bits (130), Expect = 1e-21 Identities = 170/239 (71%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || |||||||| || ||||| | ||||| | ||| | || | Sbjct 24593 AATGCAAATATTCGTCAAAACATTGACCGGAAAGACCATCACTTTGGAAGTGGAGCCGTC 24652 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| ||| | || || || ||| |||||||| || || ||||| ||||| Sbjct 24653 GGACACCATTGAGAACGTGAAGGCGAAAATTCAGGACAAAGAGGGTATTCCTCCGGATCA 24712 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | || || | || |||||||||||| ||||| | ||| || |||||||| Sbjct 24713 ACAGCGTCTTATCTTCGCCGGCAAACAACTAGAAGACGGCCGAACACTCTCTGACTATAA 24772 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA---AAATAT 27003 |||||||| || || ||| | ||| |||| || | || |||||||||| |||||| Sbjct 24773 TATTCAAAAGGAGTCGACTCTTCATTTGGTACTCCGTCTGAGAGGAGGAATGCAAATAT 24831 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || || ||||| || ||||| | ||||| | ||| | || | Sbjct 24821 AATGCAAATATTCGTGAAGACATTGACCGGAAAGACCATCACTTTGGAAGTGGAGCCGTC 24880 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||||||| | || || |||||| |||||||||||||| ||||| ||||| Sbjct 24881 GGACACCATCGAGAATGTAAAGGCTAAGATTCAAGACAAAGAAGGGATTCCTCCGGATCA 24940 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| || | || | || ||||||||||| ||||| | | | | |||||| || Sbjct 24941 GCAACGATTGATCTTCGCTGGCAAACAACTGGAAGACGGGCGCACTCTTTCCGACTACAA 25000 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 |||||||| || || || | ||| |||| || |||| ||||||||| Sbjct 25001 TATTCAAAAGGAGTCGACCCTTCATTTGGTGCTTCGACTCAGAGGAGGA 25049 Score = 100 bits (110), Expect = 3e-16 Identities = 166/239 (69%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| || || | || |||||| | || ||| | || | || | Sbjct 24365 AATGCAAATCTTTGTTAAGACTCTGACCGGAAAAACCATAACCCTTGAGGTGGAGCCCTC 24424 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||| ||| | || || || || || |||||||| || |||||||| || Sbjct 24425 CGACACCATTGAGAACGTTAAGGCCAAAATCCAAGATAAAGAAGGCATCCCTCCCGACCA 24484 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||||||||| || | || ||||||||| | ||||| | | | | ||| ||||| Sbjct 24485 ACAAAGACTGATCTTCGCCGGCAAACAGTTGGAAGACGGGCGCACTCTTTCCGATTATAA 24544 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA---AAATAT 27003 ||||||||| || || || | ||| |||| || | | |||||||||| |||||| Sbjct 24545 CATTCAAAAGGAGTCGACCCTTCATTTGGTACTCCGTTTGAGAGGAGGAATGCAAATAT 24603 Score = 93.3 bits (102), Expect = 4e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | || || || || ||||||||||| || ||||| |||||| Sbjct 24198 GACACCATTGAGAACGTAAAGGCCAAAATCCAAGACAAAGAAGGTATTCCTCCGGATCAA 24257 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| || | | ||||||||||| ||||| | ||| || || ||||| Sbjct 24258 CAGAGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGAACACTCTCTGATTATAAT 24317 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||||| || || ||| | ||| |||| || | || |||||||||| Sbjct 24318 ATTCAAAAGGAGTCGACTCTTCATTTGGTACTCCGTCTGAGAGGAGGAA 24366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478325272088400