Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7653 91.5 4e-13 seq12913 84.2 6e-11 >seq7653 Length=14825 Score = 91.5 bits (100), Expect = 4e-13 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 111327 ACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGA 111386 ||||| || ||| | ||||| ||| || ||||||||||||| |||||||| | || Sbjct 5453 ACAACTAAACGAGTCTTTTGGAGAGGAGTTCTCGAAGAACTTCTTTGGTTTATAAGAGGC 5512 Query 111387 AGTACAAATGCAAATGAACTTGCAGCAAAAAAT---GTAAAAATTTGGGATGGAAATGGA 111443 ||||| | || || || | | ||||| | || || || ||||| ||||| || Sbjct 5513 AGTACTGACGCTAAAGAGTT---ATCAAAAGTTGGGGTCAATATATGGGAGGGAAACGGT 5569 Query 111444 TCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCA 111503 || || ||||| ||| |||| || |||| |||||||| ||| | ||||| Sbjct 5570 TCCCGCACTTTTCTCGATAGTCTTGGATTTACAGACAGAGAAGAAGGAGATTTAGGACCT 5629 Query 111504 GTTTACGGATTTCAATGGCGCCACTTTGGTGC 111535 ||||| || ||||||||| | || ||||| || Sbjct 5630 GTTTATGGCTTTCAATGGAGACATTTTGGCGC 5661 >seq12913 Length=27019 Score = 84.2 bits (92), Expect = 6e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 22858 AATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAA 22917 ||||| ||||| | ||||||| |||||| | |||||||||||||||||||| || ||| Sbjct 26992 AATCCGTTTGATTTCATGGAACAAATTTCATTGGAAGGAAAGACCAATTTCTTTGAGAAA 26933 Query 22918 AGAGTTGGTGAATACCAAAAAGCAGGTGTTATGG 22951 | || ||||| || || ||| |||||||||| Sbjct 26932 CGGGTCGGTGAGTATCAGAAAAGTGGTGTTATGG 26899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302412682561790