Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_007804.2 Length=39104 Score E Sequences producing significant alignments: (Bits) Value seq11454 87.8 4e-13 seq39681 86.0 2e-12 >seq11454 Length=2477 Score = 87.8 bits (96), Expect = 4e-13 Identities = 134/183 (73%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 20279 TTGGTGGTGAACTGTGCAGGGTTGGCGTAACCGGCTA-AAAGGACCCGGCGCACCTTTCG 20337 ||||||| ||||| |||||||| | |||||||| |||||||||||| ||||| || Sbjct 1612 TTGGTGGCAAACTGAACAGGGTTGACACTACCGGCTACAAAGGACCCGGCCAACCTTACG 1553 Query 20338 GTGCCCCCACACAGCCCACCATAATACGAATGTGACCGTGCTATACGCATaaaaaaaC-C 20396 || ||||| |||| |||||| | | ||| | | | || | ||| |||||||| | Sbjct 1552 GTTGCCCCATCCAGCTCACCATTGTTCCGATG-GGCAGGACT-CATGCACAAAAAAACAC 1495 Query 20397 GCTTGCGCGGTG-AATGCGCCTTT-TAGTAACCCGGGACGCCAATCCCGGCACTGGATTT 20454 ||| || ||| |||||||||| ||| ||||||| | ||| |||| || ||||| Sbjct 1494 GCTCTCGGCGTGCTATGCGCCTTTGTAGATACCCGGGGTGTCAAGCCCGACATCTGATTT 1435 Query 20455 TGC 20457 ||| Sbjct 1434 TGC 1432 >seq39681 Length=3370 Score = 86.0 bits (94), Expect = 2e-12 Identities = 170/242 (70%), Gaps = 11/242 (5%) Strand=Plus/Minus Query 20225 TGTCATAGTG--GTTACCTTTTAGTCTGGTT-AATCACCACTACCTACGCCAATCGG--T 20279 |||||||||| ||| ||| |||| ||| ||||||| ||| | |||| | Sbjct 2416 TGTCATAGTGATGTTCCCTGTTAGATTGGAAGAATCACCGCTAGAGGTTCTAATCTCAAT 2357 Query 20280 TGGTGGTGAACTGTGCAGGGTTGGCGTAACCGGCTAA-AAGGACCCGGCGCACCTTTCGG 20338 ||| || |||||| ||||||| | ||||||||| ||||||||||| ||||| ||| Sbjct 2356 TGGCGGCGAACTGAACAGGGTTAGAACTACCGGCTAACAAGGACCCGGCCAACCTTACGG 2297 Query 20339 TGCCCCCACACAGCCCACCATAATACGAATGTGACCGTGCTATACGCATaaaaaaaC-CG 20397 | ||||| |||| |||||| | | ||| | || | | ||||||||||||| || Sbjct 2296 TTGCCCCATCCAGCTCACCATTGTTCTGATGGG--CGAGGACTGCGCATAAAAAAACACG 2239 Query 20398 CTTGCGCGGTG-AATGCG-CCTTTTAGTAACCCGGGACGCCAATCCCGGCACTGGATTTT 20455 | || ||| ||||| ||| |||| ||||||| | ||||||| || |||||| Sbjct 2238 CGGTCGGCGTGTCATGCGCCCTGTTAGATACCCGGGGTTCTAATCCCGACATCTGATTTT 2179 Query 20456 GC 20457 || Sbjct 2178 GC 2177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124927555396740