Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq17432 152 4e-32 seq214 140 3e-28 seq669 98.7 8e-16 >seq17432 Length=31749 Score = 152 bits (168), Expect = 4e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||||||| ||| || || ||||||||||| |||||||| |||| Sbjct 23972 CCTCCTCTCAGACGGAGTACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGAG 23913 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||| || | ||||||||||||| | || || | ||||||||| ||| Sbjct 23912 AGAGTGCGGCCGTCTTCTAGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGGTCGGGAGGG 23853 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||||||||| ||| | |||||| | | | |||||| ||||||| Sbjct 23852 ATGCCCTCTTTGTCCTGAATCTTGGCCTTCACGTTCTCAATGGTGTCGGAGGGCTCCACC 23793 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940 || | ||| |||||||||||||||| |||||| || ||||| |||||||||| Sbjct 23792 TCAAGGGTAATGGTTTTTCCGGTCAACGTTTTCACGAAAATTTGCATTTTGT 23741 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||||||| ||| || || ||||||||||| || || ||||| | Sbjct 24820 CCTCCTCTCAGACGGAGTACCAAATGAAGAGTCGACTCCTTTTGAATATTATAGTCAGAG 24761 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||| || | ||||||||| || | ||||| |||||||| ||| ||| Sbjct 24760 AGTGTTCGGCCGTCTTCTAGTTGTTTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGGA 24701 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||||||||| ||||| | |||||| | | | ||||| |||||| | Sbjct 24700 ATACCCTCTTTGTCCTGAATTTTCGCCTTCACGTTCTCAATGGTGTCCGACGGCTCCACT 24641 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||||| |||||||||| |||||||| || || |||||| Sbjct 24640 TCCAAAGTGATGGTCTTTCCGGTCAATGTTTTGACGAATATTTGCATT 24593 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||||||| ||| || || ||||||||||| || || || || | Sbjct 24364 CCTCCTCTCAGACGGAGTACCAAATGAAGAGTCGACTCCTTTTGAATATTATAATCAGAG 24305 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||| || | ||||||||||||| | || || | |||||| ||| ||| Sbjct 24304 AGTGTTCGGCCGTCTTCTAGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGATCCGGAGGA 24245 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || |||||||| |||| ||| || | | | ||||| |||||| | Sbjct 24244 ATACCTTCTTTGTCTTGGATTTTGGCCTTTACGTTCTCAATGGTGTCCGACGGCTCCACT 24185 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| || || || ||||||||||| || ||||| || ||||||||| Sbjct 24184 TCCAAAGTAATTGTCTTTCCGGTCAGAGTCTTGACGAATATCTGCATT 24137 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||||| ||| || || ||||||||||| ||||| || |||| | || |||| Sbjct 24577 AGTACCAAATGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTCT 24518 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| |||||||| || | || || | |||||||| ||| | ||| ||||| || Sbjct 24517 TCCAACTGTTTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATCT 24458 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 |||| ||| || | | | |||||| ||||||| || | ||| |||||| Sbjct 24457 TGGATTTTGGCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGTT 24398 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||||||||| || || ||||| || |||||| Sbjct 24397 TTTCCGGTCAGAGTCTTAACAAAGATTTGCATT 24365 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | || |||| ||| || || ||||||||||| || |||||||||| Sbjct 25048 CCTCCTCTGAGTCGAAGCACCAAATGAAGGGTCGACTCCTTTTGAATATTGTAGTCGGAA 24989 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || |||| |||| ||||||||| || | || | || || || ||| ||| Sbjct 24988 AGAGTGCGCCCGTCTTCCAGTTGTTTGCCAGCGAAGATCAATCGTTGCTGATCCGGAGGA 24929 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || |||||||| ||| | ||| || | | | ||||| |||||| | Sbjct 24928 ATCCCTTCTTTGTCTTGAATCTTAGCCTTTACATTCTCGATGGTGTCCGACGGCTCCACT 24869 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||||| |||||||||| || || || || || |||||| Sbjct 24868 TCCAAAGTGATGGTCTTTCCGGTCAATGTCTTCACGAATATTTGCATT 24821 >seq214 Length=17119 Score = 140 bits (154), Expect = 3e-28 Identities = 172/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || ||||| |||| ||| || || ||||||||||| |||||||| ||| Sbjct 956 CCTCCTCTCAGTCTCAGCACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTA 1015 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || ||||||||||| ||| | || | |||||| || ||| ||| Sbjct 1016 AGAGTTCTGCCGTCTTCTAATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGGT 1075 Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || ||||| ||| || | | | ||| |||| ||||||| Sbjct 1076 ATGCCCTCCTTGTCCTGAATCTTTGC--CTTTACATTCTCAATAGTATCGCTGGGCTCCA 1133 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || | |||||||| || || |||| ||| ||||| || || ||||||||| Sbjct 1134 CCTCAAGAGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATTTGCATTTTG 1186 >seq669 Length=42814 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || || |||||||| || |||||||| || | | || | ||||| Sbjct 31630 AGAACCAAATGGAGAGTCGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCC 31689 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || || |||||||||||| | ||||| | |||||| ||| ||| | || || ||||| Sbjct 31690 TCTAACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATACCTTCCTTGTCC 31749 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || ||||| |||||| | | | || || | |||| ||||| || |||| Sbjct 31750 TGAATCTTTGC--CTTCACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAAAGTAATGG 31807 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | |||||||| || || || || || ||||||||| Sbjct 31808 TCTTTCCGGTGAGGGTCTTCACGAATATCTGCATT 31842 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || || ||||| ||||| |||||||| || | | || | ||||| Sbjct 31858 AGGACTAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCC 31917 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || || |||||||||||| | ||||| | |||||| ||| ||| | ||| || ||||| Sbjct 31918 TCTAACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATGCCTTCCTTGTCC 31977 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || ||||| ||| || | | | || ||| || |||| ||||| || || | Sbjct 31978 TGAATCTTTGC--CTTAACGTTTTCGATGGTATCGGAGGCCTCCACTTCCAAAGTAATTG 32035 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | |||||||| || ||||| || || || |||||| Sbjct 32036 TCTTTCCGGTGAGGGTTTTCACGAATATTTGCATT 32070 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || || |||||||| || |||||||| || | | || |||| Sbjct 32312 AGAACTAAATGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCGTCT 32371 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || || |||||||||||| | || | | ||| || ||| ||| | ||| |||||||| Sbjct 32372 TCTAACTGTTTGCCCGCAAATATCAATCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCC 32431 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || ||||| ||| || | | | |||||| |||||| || | ||||| | Sbjct 32432 TGAATCTTTGC--CTTTACATTTTCGATAGTGTCAGAGGGCTCGACCTCAAGAGTGATAG 32489 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | |||||||| || ||||| ||||| || |||||||| Sbjct 32490 TCTTTCCGGTGAGGGTTTTCACAAATATTTGCATTTT 32526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404809824171550