Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_008515.1 Length=165890 Score E Sequences producing significant alignments: (Bits) Value seq54669 147 2e-30 seq13760 95.1 1e-14 >seq54669 Length=12211 Score = 147 bits (162), Expect = 2e-30 Identities = 237/338 (70%), Gaps = 2/338 (1%) Strand=Plus/Plus Query 138736 GGACTGAACAAAGTAATATAATCGTTCTTTCCGAATCGTTCCATCATCAAATCATTCAGT 138795 ||||| || | ||| || | ||||| ||| | || || | ||| || | ||| | | Sbjct 11778 GGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAATT 11837 Query 138796 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 138855 || || || ||||||||||| |||| || || ||||| || || ||||||||| || Sbjct 11838 TGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAAT 11897 Query 138856 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 138915 || | |||||||| | || |||||||| | ||| || | || || || || ||| Sbjct 11898 ACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACCA 11957 Query 138916 CGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATA 138975 || | || || || || || ||||| || ||||||||||| ||||| |||| |||||| Sbjct 11958 CGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAATA 12017 Query 138976 ACACCAGTATGGCGTACTTCACCCATG-CCAATCTTAGAACCTTCGGCACGAATCATACC 139034 ||| ||||| ||||| ||||| | ||| | ||||| ||||| || ||| Sbjct 12018 CAACCGGTATGAAAAGCTTCA-CCATGACGAATTCCACTACCTTGCGCACGGATGCGACC 12076 Query 139035 AACGTTAATACCAATTCCAGCGCGTTTAGAGATATATT 139072 | | ||||||||||| || ||||| | || | ||||| Sbjct 12077 AGCATTAATACCAATCCCCGCGCGCTGCGAAACATATT 12114 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/218 (70%), Gaps = 7/218 (3%) Strand=Plus/Plus Query 136632 TTCTTGTTCACACTCTTGAGCAATTTTAACCCATTCATCACCATCAGTACCGGATTGAAG 136691 || ||||| || | |||||||||| ||| ||| | ||||| | ||||| | | Sbjct 9638 TTGTTGTTGGCAATGATGAGCAATTTCTACCATTTCTAAATCATCATTGCCGGAACGCA- 9696 Query 136692 TTGACGAATAATATAT--TGGGTGCCTTTAAGGTGAAGCTGTTCATCGCGTGCAATGAAC 136749 | | |||| |||| || || || ||| || ||| |||||| || || || ||| Sbjct 9697 -TCAAATATAAAATATGCTGTGTTCCGGCAAGATGTAGCGCTTCATCACGAGCGATCAAC 9755 Query 136750 TTCATAATCTTGGCATTACCTTCCATGATTTCCATGTTCTTATGGAAGTTAAAGGTACAT 136809 || ||||| || |||||||||||||| | || || |||| | || ||| | ||| Sbjct 9756 TTGATAATTTTAGCATTACCTTCCATTAATT-CACGTTC--AGCAAAAGCAAACGAACAG 9812 Query 136810 GCAAAAGATACATAAAAACGAATAGCTTCTAAGGCATT 136847 |||||| |||||||| |||| ||||||||| ||||| Sbjct 9813 GCAAAACTCACATAAAAGCGAACAGCTTCTAATGCATT 9850 >seq13760 Length=57140 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 68592 TTGGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTAATGCCA 68651 ||||||||| |||| ||||||||| ||||||||||| ||||||| |||||||||||||| Sbjct 18360 TTGGAGCGGGCAATGGGAATCGAACCCACATCATCAGCTTGGAAGGCTGAGGTAATGCCA 18301 Query 68652 TTATACGATATCCGC 68666 |||||| || |||| Sbjct 18300 TTATACCATGCCCGC 18286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530346207270000