Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq17432 125 6e-24 seq669 107 2e-18 seq214 100 2e-16 >seq17432 Length=31749 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || |||||||||||||||||| | ||| || ||||| Sbjct 23954 ACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCTTCT 23895 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 |||||||| || || |||| || | ||||||||| ||||| ||||| |||||||| | Sbjct 23894 AGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCCTCTTTGTCCTGA 23835 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | |||| |||||||| || || || || | ||| | ||||| Sbjct 23834 ATCTTGGCCTTCACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTAATGGTTTTT 23775 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||||| ||||| || ||||| ||||| Sbjct 23774 CCGGTCAACGTTTTCACGAAAATTTGCAT 23746 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || ||||||||||| |||||| | ||| || ||||| Sbjct 24574 ACCAAATGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTCTTCC 24515 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 | ||||| || ||| |||| || | |||||||| ||||| ||||||||||| || Sbjct 24514 AACTGTTTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATCTTGG 24455 Query 114294 ATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 || ||| | ||| | | |||| |||||||| || || || || | ||| | ||||| Sbjct 24454 AT-TTTGGCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGTTTT 24396 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||||||||| || ||||| || ||||| Sbjct 24395 TCCGGTCAGAGTCTTAACAAAGATTTGCAT 24366 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || |||||||| || ||||| | || || ||||| Sbjct 24346 ACCAAATGAAGAGTCGACTCCTTTTGAATATTATAATCAGAGAGTGTTCGGCCGTCTTCT 24287 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 |||||||| || || |||| || | |||||| ||||||||||| ||||||||||| Sbjct 24286 AGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTCTTTGTCTTGG 24227 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 || || |||| | |||| |||||| | | || || |||| || | || || Sbjct 24226 ATTTTGGCCTTTACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTAATTGTCTTT 24167 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||||||||| || || || |||||||| Sbjct 24166 CCGGTCAGAGTCTTGACGAATATCTGCAT 24138 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || |||||||| ||||| ||| | ||| || ||||| Sbjct 25030 ACCAAATGAAGGGTCGACTCCTTTTGAATATTGTAGTCGGAAAGAGTGCGCCCGTCTTCC 24971 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 |||||||| |||||| |||| | || || || ||||||||||| ||||||||||| | Sbjct 24970 AGTTGTTTGCCAGCGAAGATCAATCGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTGA 24911 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| |||| | || | |||||| | | || || |||| || | || || Sbjct 24910 ATCTTAGCCTTTACATTCTCGATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTTT 24851 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||||| || || || || || ||||| Sbjct 24850 CCGGTCAATGTCTTCACGAATATTTGCAT 24822 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || |||||||| || || || | || || ||||| Sbjct 24802 ACCAAATGAAGAGTCGACTCCTTTTGAATATTATAGTCAGAGAGTGTTCGGCCGTCTTCT 24743 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 |||||||| || ||| |||| ||||||||||| ||||||||||| || |||||||| | Sbjct 24742 AGTTGTTTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGGAATACCCTCTTTGTCCTGA 24683 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 || || || | | |||| |||||| | | || || |||| || | || || Sbjct 24682 ATTTTCGCCTTCACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTTT 24623 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||||| ||||| || || || ||||| Sbjct 24622 CCGGTCAATGTTTTGACGAATATTTGCAT 24594 >seq669 Length=42814 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 |||||||| | || || |||||||| ||||||||||| | ||| || || || Sbjct 31861 ACTAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCT 31920 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 | ||||| || || |||| || | |||||| ||||||||||||||||| ||||| | Sbjct 31921 AACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATGCCTTCCTTGTCCTGA 31980 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 |||||| || | | ||| | ||| |||| || || || |||| || | || || Sbjct 31981 ATCTTTGCCTTAACGTTTTCGATGGTATCGGAGGCCTCCACTTCCAAAGTAATTGTCTTT 32040 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || ||||| || || || ||||| Sbjct 32041 CCGGTGAGGGTTTTCACGAATATTTGCAT 32069 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||||||||| | || || || || |||||||||||||| | ||| || ||||| Sbjct 32314 AACTAAATGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCGTCTTC 32373 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 | ||||| || || | || | | ||| || ||||||||||||||||||||||| Sbjct 32374 TAACTGTTTGCCCGCAAATATCAATCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTG 32433 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||||| |||| | ||| | ||||| | || ||||| || | || | || || Sbjct 32434 AATCTTTGCCTTTACATTTTCGATAGTGTCAGAGGGCTCGACCTCAAGAGTGATAGTCTT 32493 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || ||||| ||||| || ||||| Sbjct 32494 TCCGGTGAGGGTTTTCACAAATATTTGCAT 32523 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| ||||| | || || || || |||||||||||||| | ||| || || || Sbjct 31632 AACCAAATGGAGAGTCGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTC 31691 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 | ||||| || || |||| || | |||||| ||||||||||| ||||| ||||| Sbjct 31692 TAACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATACCTTCCTTGTCCTG 31751 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||||| || | | ||| | ||| || | | || || |||| || | || || Sbjct 31752 AATCTTTGCCTTCACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAAAGTAATGGTCTT 31811 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || || || || || |||||||| Sbjct 31812 TCCGGTGAGGGTCTTCACGAATATCTGCAT 31841 >seq214 Length=17119 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||||| || ||||| | || || || ||||| |||||||||||||| | ||| | Sbjct 965 AGTCTCAGCACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTAAGAGTTCTG 1024 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 ||||| | |||||| ||||| |||| | ||||| || |||||||| ||||| || Sbjct 1025 CCGTCTTCTAATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGGTATGCCCTCC 1084 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| ||||||| |||| | |||| || ||| ||| || || || | || Sbjct 1085 TTGTCCTGAATCTTTGCCTTTACATTCTCAATAGTATCGCTGGGCTCCACCTCAAGAGTG 1144 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || |||| || || || || || ||||| Sbjct 1145 ATGGTCTTACCCGTCAACGTCTTGACGAAGATTTGCAT 1182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419845891738140