Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq17432 154 3e-32 seq669 122 2e-22 seq214 122 2e-22 >seq17432 Length=31749 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 ||||| | ||||| || || ||||| ||||||||||| | ||| || || |||||| Sbjct 24805 AGTACCAAATGAAGAGTCGACTCCTTTTGAATATTATAGTCAGAGAGTGTTCGGCCGTCT 24746 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 |||| |||||| || |||||||| |||||||||||| || || || ||||| ||| Sbjct 24745 TCTAGTTGTTTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGGAATACCCTCTTTGTCC 24686 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 || |||||||| |||||||| || || | || || || ||||| | ||||| ||| Sbjct 24685 TGAATTTTCGCCTTCACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTC 24626 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || ||||||| || ||||||||||| |||||| Sbjct 24625 TTTCCGGTCAATGTTTTGACGAATATTTGCATT 24593 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 ||||| | ||||| || || ||||| |||||||| || | ||| || || |||||| Sbjct 24349 AGTACCAAATGAAGAGTCGACTCCTTTTGAATATTATAATCAGAGAGTGTTCGGCCGTCT 24290 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 |||| |||||| || || |||||||| | ||||||| || || |||||||| || Sbjct 24289 TCTAGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTCTTTGTCT 24230 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| || || ||||| || || | || || || ||||| | || || ||| Sbjct 24229 TGGATTTTGGCCTTTACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTAATTGTC 24170 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || |||||||||||||||||||||||||||||| Sbjct 24169 TTTCCGGTCAGAGTCTTGACGAATATCTGCATT 24137 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 ||||| | ||||| || || ||||| || ||||| |||| || ||||| |||||| Sbjct 24577 AGTACCAAATGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTCT 24518 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || || ||||| || ||||||||||| | ||||| ||||| ||||||||||| Sbjct 24517 TCCAACTGTTTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATCT 24458 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| || || ||||| || || | ||| | || || || || || || || Sbjct 24457 TGGATTTTGGCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGTT 24398 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || |||||||||||||| || || || |||||| Sbjct 24397 TTTCCGGTCAGAGTCTTAACAAAGATTTGCATT 24365 >seq669 Length=42814 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || || || | ||| ||||| ||||| ||||| ||||| || || ||| Sbjct 31879 TCTTTTTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCTAACTGTTTGCCCGCAAAG 31938 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||||||| || || ||||| || ||||| || || || || |||||| Sbjct 31939 ATAAGTCTCTGTTGATCCGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACGTTT 31998 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||| | || ||||| | || || ||||| ||||| || || || ||| Sbjct 31999 TCGATGGTATCGGAGGCCTCCACTTCCAAAGTAATTGTCTTTCCGGTGAGGGTTTTCACG 32058 Query 288463 AATATCTGCATT 288474 ||||| |||||| Sbjct 32059 AATATTTGCATT 32070 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || || || | ||| ||||| ||||| ||||| ||||| || || ||| Sbjct 31651 TCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCTAACTGTTTGCCCGCAAAG 31710 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||||||| || || ||||| || ||||| || || || ||||||||| Sbjct 31711 ATAAGTCTCTGTTGATCCGGAGGAATACCTTCCTTGTCCTGAATCTTTGCCTTCACGTTT 31770 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| | || ||||| | || || ||||| ||||| || ||||| ||| Sbjct 31771 TCGATGGTATCCGAAGCCTCCACTTCCAAAGTAATGGTCTTTCCGGTGAGGGTCTTCACG 31830 Query 288463 AATATCTGCATT 288474 |||||||||||| Sbjct 31831 AATATCTGCATT 31842 Score = 104 bits (114), Expect = 6e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || || || | ||| ||||||||||||||||| ||||| || || || Sbjct 32333 TCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCGTCTTCTAACTGTTTGCCCGCAAAT 32392 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| ||| || || |||||||| ||||| || || || || || ||| Sbjct 32393 ATCAATCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCCTTTACATTT 32452 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || | || || || || ||||| ||||| ||||| || || || || Sbjct 32453 TCGATAGTGTCAGAGGGCTCGACCTCAAGAGTGATAGTCTTTCCGGTGAGGGTTTTCACA 32512 Query 288463 AATATCTGCATT 288474 ||||| |||||| Sbjct 32513 AATATTTGCATT 32524 >seq214 Length=17119 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| || || | ||||| || || |||||||| || || ||| || || | Sbjct 965 AGTCTCAGCACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTAAGAGTTCTG 1024 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 ||||||||||||||||| || || ||||||| ||||| ||| || || || || Sbjct 1025 CCGTCTTCTAATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGGTATGCCCTCC 1084 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 || ||||| || || || || || || || |||| |||||| | || || || || ||| Sbjct 1085 TTGTCCTGAATCTTTGCCTTTACATTCTCAATAGTATCGCTGGGCTCCACCTCAAGAGTG 1144 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || ||||| || |||| ||||||||||| || |||||| || Sbjct 1145 ATGGTCTTACCCGTCAACGTCTTGACGAAGATTTGCATTTTG 1186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178802783526910