Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_010106.1 Length=52975 Score E Sequences producing significant alignments: (Bits) Value seq54669 360 6e-95 >seq54669 Length=12211 Score = 360 bits (398), Expect = 6e-95 Identities = 746/1101 (68%), Gaps = 36/1101 (3%) Strand=Plus/Minus Query 51857 ATGGCTTACACTACCTTTTCACAAACCAAGAATAACCAATTACTAGAGCCAATGTTCTTT 51916 |||||||| || || ||||| || | || |||||||||||| | || || ||||| ||| Sbjct 10453 ATGGCTTATACCACTTTTTCCCATAAAAAAAATAACCAATTAATTGAACCGATGTTTTTT 10394 Query 51917 GGTCAGAACGTTAACGTTGCTCGATATGACCAACAGAAGTACGGCATATTCGAGAAGTTA 51976 |||||| || ||||| | || | ||| || || || | ||| || || || || Sbjct 10393 GGTCAGCCAGTAAACGTCTCACGCTTTGATCAGCAAAAACATATCATGTTTGAAAAATTG 10334 Query 51977 ATTGAGAAACAATTGTCATTCTTCTGGCGACCGGAAGAGGTAGACGTTTCCCAGGACCGT 52036 ||||| ||||| | || || || ||||| ||||||||| | || ||| | | || | Sbjct 10333 ATTGAAAAACAGCTTTCCTTTTTTTGGCGGCCGGAAGAGATTGATGTTGCACGTGATAGA 10274 Query 52037 ATTGATTATCAGAAGCT--ACCTGCAAACGAACAACACATTTTCACCAGTAATCTTCGTT 52094 || || ||| | ||| ||||| | ||| || | ||||| | |||||| | | Sbjct 10273 ATCGACTAT--GCTGCTTTACCTGAGCATGAAAAAAATATTTTTATTAGTAATTTAAAAT 10216 Query 52095 ATCAGATTCTTCTTGACTCAATTCAGGGACGTGGGCCCAACACAGTTTTGCTTCCAATCG 52154 |||| | || | || ||||| |||||||| | || |||| | ||| | ||| | Sbjct 10215 ATCAAACCCTGTTAGATTCAATCCAGGGACGCAGCCCTAACATTGCTTTATTACCATTAA 10156 Query 52155 TGAGCATTCCTGAATTGGAGACGTGGATTGAAACCTGGTCTTTCTCCGAGACTATTCATT 52214 | ||||||||| |||| || ||| | || |||||||| || | ||||| | |||| Sbjct 10155 TTTCTATTCCTGAACTGGAAACTTGGGTGGAGACCTGGTCATTTTTTGAGACCTTACATT 10096 Query 52215 CACGTTCTTATACCCACATCATTCGTAATATTGTTACAGACCCAAGCATTATCTTTGATG 52274 | ||||||||||| || || |||||||||||||| | || || | | ||||| | Sbjct 10095 CTCGTTCTTATACGCATATTATTCGTAATATTGTCAACGATCCTTCGGTGGTATTTGAGG 10036 Query 52275 AAATCGTAACTAACGAACACATCAAGGCACGAGCAATTGGCATCTCCCAATATTATGACG 52334 | || || ||||| || | ||| ||| |||| | || || || ||||| Sbjct 10035 ATATTGTCACTAATCAAGAAATCTTAAAACGGGCAAAGGATATTTCTGCTTACTATGATC 9976 Query 52335 AACTCCAGCAACTCACTGCATTATGG-CAGTTGTTCGGAGAAGGGAGCCATGCTGGTCAT 52393 || | | ||| ||||| || || || ||||| || ||||| || | | Sbjct 9975 TTCTGATTGAGATGACTA-ATTATTATCATTTATTAGGAGAGGGTTGCCAT-CTAATAAA 9918 Query 52394 -----GAA--ATTA------GTCTGCGTGAGTTGAAGAAGAAGCTGTATTTATGCCTCAT 52440 ||| |||| || | | | || || ||| ||||||||||||| || || Sbjct 9917 TGGTAGAACGATTACCGTCAGTTTACCTACATTAAAAAAGCAGCTGTATTTATGTCTGAT 9858 Query 52441 GTCTATCAATGCATTGGAAGCAATTCGCTTCTATGTCAGCTTTGCTTGCTCATTTGCCTT 52500 | | |||||||||| ||||| ||||||| ||||| || ||||| || || ||||| || Sbjct 9857 GAGTGTCAATGCATTAGAAGCTGTTCGCTTTTATGTGAGTTTTGCCTGTTCGTTTGCTTT 9798 Query 52501 CGCAGAACGTAAGTTAATGGAAGGAAATGCCAAGATTATTCGCTTAATTGCACGAGATGA 52560 || |||||| | ||||||||||| ||||| || ||||| || || || || ||||| Sbjct 9797 TGCTGAACGTGAATTAATGGAAGGTAATGCTAAAATTATCAAGTTGATCGCTCGTGATGA 9738 Query 52561 AGCACTTCATTTGACAGGAACTCAGCACATGCTGAACCTTCTTGCAAGT---GGAAAAGA 52617 ||| || ||| | | ||||| ||||| || | | || ||| || || || || Sbjct 9737 AGCGCTACATCTTGCCGGAACACAGCATAT-TTTATATTTGATGC--GTTCCGGCAATGA 9681 Query 52618 TGACCCAGAAATGGGTGAAATTGCTGCTGAATGCCGCCAAGAATGCCAGAAATTGTTCGA 52677 ||| |||||||| ||||||||| | | |||| ||| |||| | | || |||| Sbjct 9680 TGATTTAGAAATGGTAGAAATTGCTCATCATTGCCAACAACAATGTTACGATTTATTCGT 9621 Query 52678 AGATGCTGCTCAACAAGAGAAGGATTGGGCCGATTATTTGTTCAAAGATGGCTCTATGAT 52737 || || ||||| ||||| |||||||| || ||||| || ||||| |||||||| Sbjct 9620 CTCGGCAGCACAACAGGAGAAAGATTGGGCGGAATATTTATTTCGCGATGGTTCTATGAT 9561 Query 52738 TGGCTTAAACAAGCAAATTCTATGCGGATATGTGGAATATATCACGAATATTCGTATGCA 52797 ||| | || || | ||||| || || | ||||| || || ||||| |||||||| Sbjct 9560 TGGACTGAATAAAGACATTCTTTGTCAGTACATTGAATACATTACCAATATCCGTATGCA 9501 Query 52798 AGCAGTTGGATTAGATGCTCCATTCAAAGGTGCAAC-----TAACCCGATTCCGTGGATT 52852 ||| || || |||| || || || | ||| | |||||||||||| ||||| Sbjct 9500 AGCTGTGGGGTTAGCAGCACCTTTTA-----GCATCCGTTTTAACCCGATTCCCTGGATA 9446 Query 52853 AATGCATGGTTGAATTCGGATGCTGTACAGGTTGCTCCACAGGAAACGGAGATTAGTTCC 52912 ||||| ||| | || ||| || || ||||| || || ||| ||| ||||||| Sbjct 9445 AATGCCTGGCTAGTATCCGATAACGTTCAAGTTGCGCCTCAAGAAGTAGAGGTTAGTTCT 9386 Query 52913 TACCTGGTCGGGCAAATTGAC 52933 ||| |||| || ||||||||| Sbjct 9385 TACTTGGTGGGACAAATTGAC 9365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169285056059930