Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq214 116 4e-21 seq17432 114 1e-20 seq426 100 3e-16 seq49858 96.9 4e-15 seq669 96.9 4e-15 >seq214 Length=17119 Score = 116 bits (128), Expect = 4e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | | || ||||||||| | || ||||||||| || |||||||| Sbjct 956 CCTCCTCTCAGTCTCAGCACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTA 1015 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| | |||| |||| || || ||||| || || | |||||||| || | || Sbjct 1016 AGAGTTCTGCCGTCTTCTAATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGGT 1075 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || |||||||||| ||| | |||| || | || | | || ||||| | ||||| Sbjct 1076 ATGCCCTCCTTGTCC-TGAATCTTTGCCTTTACATTCTCAATAGTATCGCTGGGCTCCAC 1134 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || | |||||||| || ||||| | |||||| || |||||||||||||| Sbjct 1135 CTCAAGAGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATTTGCATTTT 1185 >seq17432 Length=31749 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| ||||| | |||||||| | || |||||||||||| || ||||| | Sbjct 24592 CCTCCTCTCAAACGGAGTACCAAATGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAA 24533 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| ||| |||| || | ||| || || ||||| || |||| || ||||||| || Sbjct 24532 AGAGTGCGCCCGTCTTCCAACTGTTTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGG 24473 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || || || || |||||| || | || | | |||||| | ||||| Sbjct 24472 ATGCCTTCTTTATCTTGGATTTTGGCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACC 24413 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | || |||||||| || || || ||||| ||||||||||||||| Sbjct 24412 TCAAGGGTTATGGTTTTTCCGGTCAGAGTCTTAACAAAGATTTGCATT 24365 Score = 113 bits (124), Expect = 5e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | ||| | |||||||| | || |||||||||||| |||||||| | Sbjct 23972 CCTCCTCTCAGACGGAGTACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGAG 23913 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || |||| ||||| || || || || || || |||| ||| ||||||| || Sbjct 23912 AGAGTGCGGCCGTCTTCTAGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGGTCGGGAGGG 23853 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || ||| |||||| ||| | || | || | || | | |||||| | ||||| Sbjct 23852 ATGCCCTCTTTGTCC-TGAATCTTGGCCTTCACGTTCTCAATGGTGTCGGAGGGCTCCAC 23794 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || | || |||||||| || || | ||| || || || ||||||||||| Sbjct 23793 CTCAAGGGTAATGGTTTTTCCGGTCAACGTTTTCACGAAAATTTGCATTTT 23743 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | ||| | |||||||| | || ||||||||||||||| || |||| Sbjct 24820 CCTCCTCTCAGACGGAGTACCAAATGAAGAGTCGACTCCTTTTGAATATTATAGTCAGAG 24761 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || |||| ||||| || || || ||||| || || ||||| || || | || Sbjct 24760 AGTGTTCGGCCGTCTTCTAGTTGTTTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGGA 24701 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||| |||||| ||| |||| | || | || | | ||||| || ||||| Sbjct 24700 ATACCCTCTTTGTCC-TGAATTTTCGCCTTCACGTTCTCAATGGTGTCCGACGGCTCCAC 24642 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | |||||||| || || || | || || || || ||||||||| Sbjct 24641 TTCCAAAGTGATGGTCTTTCCGGTCAATGTTTTGACGAATATTTGCATT 24593 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | || | ||||||||| | || |||||||||||||||||| || | Sbjct 25048 CCTCCTCTGAGTCGAAGCACCAAATGAAGGGTCGACTCCTTTTGAATATTGTAGTCGGAA 24989 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| ||| |||| || || || || |||||||| || | ||| ||||| || | || Sbjct 24988 AGAGTGCGCCCGTCTTCCAGTTGTTTGCCAGCGAAGATCAATCGTTGCTGATCCGGAGGA 24929 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || |||| | ||| | || | || | || | | ||||| || ||||| Sbjct 24928 ATCCCTTCTTTGT-CTTGAATCTTAGCCTTTACATTCTCGATGGTGTCCGACGGCTCCAC 24870 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | |||||||| || || || | ||||| || || ||||||||| Sbjct 24869 TTCCAAAGTGATGGTCTTTCCGGTCAATGTCTTCACGAATATTTGCATT 24821 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | ||| | |||||||| | || ||||||||||||||| ||||||| Sbjct 24364 CCTCCTCTCAGACGGAGTACCAAATGAAGAGTCGACTCCTTTTGAATATTATAATCAGAG 24305 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || |||| ||||| || || || || || || |||| ||| || || | || Sbjct 24304 AGTGTTCGGCCGTCTTCTAGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGATCCGGAGGA 24245 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | || ||||| |||||| || | || | | ||||| || ||||| Sbjct 24244 ATACCTTCTTTGTCTTGGATTTTGGCCTTTACGTTCTCAATGGTGTCCGACGGCTCCACT 24185 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | || || || || || || || ||||| || || || |||||| Sbjct 24184 TCCAAAGTAATTGTCTTTCCGGTCAGAGTCTTGACGAATATCTGCATT 24137 >seq426 Length=28870 Score = 100 bits (110), Expect = 3e-16 Identities = 72/83 (87%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 56997 GAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| ||||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 18653 GAAAAAAGATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 18594 Query 57057 CTCACCACTATACTACCGAGGAT 57079 || |||||||||||||||||||| Sbjct 18593 CTAACCACTATACTACCGAGGAT 18571 >seq49858 Length=227 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 60 Query 57067 TACTACCGAGGAT 57079 ||||||||||||| Sbjct 61 TACTACCGAGGAT 73 >seq669 Length=42814 Score = 96.9 bits (106), Expect = 4e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| ||||| | || ||||| | || |||||| ||||| |||||||||| Sbjct 32297 CCTCCTCTCAAACGAAGAACTAAATGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGAG 32356 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || |||| |||| ||| || || || ||||| | || |||||| || | || Sbjct 32357 AGAGTGCGTCCGTCTTCTAACTGTTTGCCCGCAAATATCAATCTCTGCTGATCCGGAGGA 32416 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || || |||||| ||| | |||| || | | | | ||||| | || || Sbjct 32417 ATGCCTTCTTTGTCC-TGAATCTTTGCCTTTACATTTTCGATAGTGTCAGAGGGCTCGAC 32475 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212 || | ||||| || || || || || || || ||||| |||||||||||| Sbjct 32476 CTCAAGAGTGATAGTCTTTCCGGTGAGGGTTTTCACAAATATTTGCATTTTC 32527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542830208434800