Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq214 134 1e-26 seq669 132 5e-26 seq17432 131 2e-25 >seq214 Length=17119 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | || ||| ||||| | ||||| ||||| || ||||| ||||||||||| || Sbjct 956 CCTCCTCTCAGTCTCAGCACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATC-GCT 1014 Query 64277 ACG-GTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | | || | ||||||| | || ||||| ||| | || | ||||||||| || ||||| Sbjct 1015 AAGAGTTCTGCCGTCTTCTAATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGG 1074 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || ||| ||||||| ||| | ||||| | || ||||| Sbjct 1075 TATGCCCTCCTTGTCCTGAATCTTTGCCTTTACATTCTCAATAGTATCGCTGGGCTCCAC 1134 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | ||| | |||||| || ||||| || || ||||| ||||||||||| Sbjct 1135 CTCAAGAGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATTTGCATTTT 1185 >seq669 Length=42814 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | ||| | ||| |||| ||||| || || |||||||| ||||||||||| | | Sbjct 31843 CCTCCTCTCAAACGAAGGACTAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGAG 31902 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || | ||| ||||| ||| | || || | ||| || || |||||| Sbjct 31903 AGAGTGCGGCCGTCCTCTAACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGA 31962 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || ||||| || || || || ||| ||| || || | ||||| ||| |||||| Sbjct 31963 ATGCCTTCCTTGTCCTGAATCTTTGCCTTAACGTTTTCGATGGTATCGGAGGCCTCCACT 32022 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | ||| | ||||| ||||| | ||||| ||||| ||||||||| Sbjct 32023 TCCAAAGTAATTGTCTTTCCGGTGAGGGTTTTCACGAATATTTGCATT 32070 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | ||| | ||| |||| ||||| || || || || |||||||||||||| | | Sbjct 32297 CCTCCTCTCAAACGAAGAACTAAATGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGAG 32356 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| ||||||| | ||| ||||| ||| | || | | |||||| || |||||| Sbjct 32357 AGAGTGCGTCCGTCTTCTAACTGTTTGCCCGCAAATATCAATCTCTGCTGATCCGGAGGA 32416 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || |||||||| || || || ||| ||||||| || | || ||| || || || Sbjct 32417 ATGCCTTCTTTGTCCTGAATCTTTGCCTTTACATTTTCGATAGTGTCAGAGGGCTCGACC 32476 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | ||| | ||||| ||||| | ||||| || || ||||||||||| Sbjct 32477 TCAAGAGTGATAGTCTTTCCGGTGAGGGTTTTCACAAATATTTGCATTTT 32526 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | ||| | ||| || | ||| | ||||| || || |||||||||||||| | | Sbjct 31615 CCTCCTCTCAAACGAAGAACCAAATGGAGAGTCGACTCCTTCTGAATGTTGTAATCAGAG 31674 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || | ||| ||||| ||| | || || | ||| || || |||||| Sbjct 31675 AGAGTGCGGCCGTCCTCTAACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGA 31734 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || ||||| || || || || ||| ||| || || | ||||| || |||||| Sbjct 31735 ATACCTTCCTTGTCCTGAATCTTTGCCTTCACGTTTTCGATGGTATCCGAAGCCTCCACT 31794 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | ||| | |||||| ||||| | || || ||||| || |||||| Sbjct 31795 TCCAAAGTAATGGTCTTTCCGGTGAGGGTCTTCACGAATATCTGCATT 31842 >seq17432 Length=31749 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || || || ||||||||||||||||| | || ||||| ||||| Sbjct 23957 AGTACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCT 23898 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || ||||| ||| | || || | ||| ||||||||||| || || ||||| || Sbjct 23897 TCTAGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCCTCTTTGTCC 23838 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || ||| | || || || ||||| || | || | ||| Sbjct 23837 TGAATCTTGGCCTTCACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTAATGGTT 23778 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || |||||||| ||||| ||||||||||||||||| Sbjct 23777 TTTCCGGTCAACGTTTTCACGAAAATTTGCATTTT 23743 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| ||||| || ||||||||||| ||||| | | |||||| ||||| Sbjct 24577 AGTACCAAATGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTCT 24518 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||| |||||||| | || || | || ||||||||||| || |||||||| ||| Sbjct 24517 TCCAACTGTTTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATCT 24458 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| || ||| | || || || ||||| || | |||| ||| Sbjct 24457 TGGATTTTGGCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGTT 24398 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || ||||||| ||| || || || ||||||||| Sbjct 24397 TTTCCGGTCAGAGTCTTAACAAAGATTTGCATT 24365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499292893921800