Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq17432 111 1e-19 seq214 102 8e-17 seq669 96.9 3e-15 >seq17432 Length=31749 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 126898 TCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGA 126957 ||| | ||||||||| | || ||||| |||||||||||||| ||| | ||||| Sbjct 25037 TCGAAGCACCAAATGAAGGGTCGACTCCTTTTGAATATTGTAGTCGGAAAGAGTGCGCCC 24978 Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 || || || ||||| |||||| |||||||||| |||||||| ||||| || || || || Sbjct 24977 GTCTTCCAGTTGTTTGCCAGCGAAGATCAATCGTTGCTGATCCGGAGGAATCCCTTCTTT 24918 Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| || || ||| | | |||| |||||||| ||| ||||| | || | Sbjct 24917 GTCTTGAATCTTAGCCTTTACATTCTCGATGGTGTCCGACGGCTCCACTTCCAAAGTGAT 24858 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||||| || || || || || ||||| Sbjct 24857 GGTCTTTCCGGTCAATGTCTTCACGAATATTTGCAT 24822 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || ||||| ||||||||||| ||||| | || || || ||| Sbjct 24346 ACCAAATGAAGAGTCGACTCCTTTTGAATATTATAATCAGAGAGTGTTCGGCCGTCTTCT 24287 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || || |||||| || ||| ||||| ||||| || || || ||||| | Sbjct 24286 AGTTGTTTGCCCGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTCTTTGTCTTGG 24227 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| ||| | | || | |||||||| ||| ||||| | || | || || Sbjct 24226 ATTTTGGCCTTTACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTAATTGTCTTT 24167 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||||||| || || || |||||||| Sbjct 24166 CCGGTCAGAGTCTTGACGAATATCTGCAT 24138 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || ||||| |||||||| || |||||| | ||||| || || Sbjct 24574 ACCAAATGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTCTTCC 24515 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | |||||| || ||| |||||| || || || |||||||| ||||| || || || | Sbjct 24514 AACTGTTTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATCTTGG 24455 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| ||| | | || | |||||| | ||| || || | ||| | ||||| Sbjct 24454 ATTTTGGCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGTTTTT 24395 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||||||| || ||||| || ||||| Sbjct 24394 CCGGTCAGAGTCTTAACAAAGATTTGCAT 24366 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || ||||| ||||||||||| || || | || || || ||| Sbjct 24802 ACCAAATGAAGAGTCGACTCCTTTTGAATATTATAGTCAGAGAGTGTTCGGCCGTCTTCT 24743 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || ||| |||| | ||||| ||||| ||||| || ||||| |||||| Sbjct 24742 AGTTGTTTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGGAATACCCTCTTTGTCCTGA 24683 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 |||||| ||| | | || | |||||||| ||| ||||| | || | || || Sbjct 24682 ATTTTCGCCTTCACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTTT 24623 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||| ||||| || || || ||||| Sbjct 24622 CCGGTCAATGTTTTGACGAATATTTGCAT 24594 >seq214 Length=17119 Score = 102 bits (112), Expect = 8e-17 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 126898 TCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGA 126957 || || ||||||||| | || ||||| ||||| || |||||||||| | || | Sbjct 967 TCTCAGCACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTAAGAGTTCTGCC 1026 Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 || |||| ||||| ||||| ||||||| ||||||||||| ||||||||||||||||| Sbjct 1027 GTCTTCTAATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGGTATGCCCTCCTT 1086 Query 127018 GTCC 127021 |||| Sbjct 1087 GTCC 1090 >seq669 Length=42814 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||| | || ||||||||||| || |||||||| | ||||| || ||| Sbjct 31861 ACTAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCT 31920 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | |||||| || || |||| | || ||| ||||| ||||| ||||| ||||||||| || Sbjct 31921 AACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATGCCTTCCTTGTCC-TG 31979 Query 127025 ATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | | | || ||| | | ||||| ||| || | ||| ||||| | || | || || Sbjct 31980 AATCTTTGCCTTAACGTTTTCGATGGTATCGGAGGCCTCCACTTCCAAAGTAATTGTCTT 32039 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || ||||| || || || ||||| Sbjct 32040 TCCGGTGAGGGTTTTCACGAATATTTGCAT 32069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475165898842800