Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq54669 192 6e-44 >seq54669 Length=12211 Score = 192 bits (212), Expect = 6e-44 Identities = 313/450 (70%), Gaps = 3/450 (1%) Strand=Plus/Plus Query 139621 ACCCGCAACATC---TGGACTAAACAGAGTAATGTAATCCCGTTTAAGGAATCGCTCTAC 139677 ||||| ||| || ||||||||| ||||| || | || ||| | || |||| Sbjct 11762 ACCCGGAACGTCAGATGGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATA 11821 Query 139678 CATCAGGTTATTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCC 139737 ||| | |||||||| ||||| |||||||| | ||| |||| || |||||||| || || Sbjct 11822 CATAAATTTATTAATTTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACC 11881 Query 139738 CTTATTGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAG 139797 || || ||||| || | |||| |||| | |||||||||||| | || || | | Sbjct 11882 ACGGTTATTTTTTAATACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAA 11941 Query 139798 AGTCGCCGCCCCGCCACGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATG 139857 || || || || ||||| | || ||||| || || || || || || |||||||| || Sbjct 11942 CGTTGCTGCACCACCACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTG 12001 Query 139858 TTTCCAGAATGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGATCCTTC 139917 ||| | || || ||| || |||||| | |||||||||| | || | |||| Sbjct 12002 TTTATAAAACGGAATACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTG 12061 Query 139918 CGCGCGAATCATGCCAGCGTTGATACCGATACCAGCACGCTTGCTAATATACTTGATGAT 139977 ||| || || ||||| || ||||| || || || |||| || ||| || ||||| Sbjct 12062 CGCACGGATGCGACCAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGAT 12121 Query 139978 TGCATTTGCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCGATCACCACACACGA 140037 ||| ||||||| | ||||| | ||| ||| ||| ||| |||| ||||| || Sbjct 12122 TGCGCTTGCTGTGGCATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGA 12181 Query 140038 ACTAAATTGGCGTGTTGGGGTACGCACACC 140067 ||||||||||| || || ||||| ||||| Sbjct 12182 GCTAAATTGGCGGGTAGGCGTACGTACACC 12211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532034617263600