Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_012741.1 Length=171451 Score E Sequences producing significant alignments: (Bits) Value seq54669 172 6e-38 >seq54669 Length=12211 Score = 172 bits (190), Expect = 6e-38 Identities = 261/369 (71%), Gaps = 2/369 (1%) Strand=Plus/Plus Query 143014 CCGTAGTCCATATGACGAATACGGTTTTCATCGACACCTTTGTTGTTTTTCAGAACGAGC 143073 ||||| |||||||| |||| ||| || || || ||||| ||| ||||| | || | | Sbjct 11844 CCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAATACCAAC 11903 Query 143074 AGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATT 143133 |||||||| | || |||||||| | ||| || | || || || || ||||| | Sbjct 11904 AGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACCACGCACA 11963 Query 143134 CCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCA 143193 || ||||| ||||| ||||| || |||||||| || ||||| | || |||||| ||| Sbjct 11964 CCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAATACAACCG 12023 Query 143194 GTATGTTTGACTTCACCCATGCC-AATACGAGAACCTTCAGCACGAATCATACCAACGTT 143252 ||||| ||||||| ||| | ||| | | ||||| ||||| || |||| | || Sbjct 12024 GTATGAAAAGCTTCACC-ATGACGAATTCCACTACCTTGCGCACGGATGCGACCAGCATT 12082 Query 143253 AATACCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTTGCAGTTTTGTTAAT 143312 ||||||||| || || || | |||| |||| || |||| | |||| || || || Sbjct 12083 AATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGCGCTTGCTGTGGCATTGAT 12142 Query 143313 AGATTTCAGTGAGTCACCTGCTTCAATAACAACACAAGAACTAAATTGACGGGTTGGAGT 143372 ||| | || ||| || ||| || | |||||||| |||||||| ||||| || || Sbjct 12143 AGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAAATTGGCGGGTAGGCGT 12202 Query 143373 ACGTGCACC 143381 |||| |||| Sbjct 12203 ACGTACACC 12211 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/149 (74%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 140950 AATATATTGGGTGCCTTTAAGGTGAAGCTGTTCATCACGTGCAATGAACTTCATAATCTT 141009 ||||| || || || ||| || ||| ||||||||| || || ||||| ||||| || Sbjct 9707 AATATGCTGTGTTCCGGCAAGATGTAGCGCTTCATCACGAGCGATCAACTTGATAATTTT 9766 Query 141010 AGCATTACCTTCCATGATTTCCATATTCTTATGGAAGTTAAAGGTACATGCAAAAGATAC 141069 ||||||||||||||| | || || ||| | || ||| | ||| |||||| || Sbjct 9767 AGCATTACCTTCCATTAATT-CACGTTC--AGCAAAAGCAAACGAACAGGCAAAACTCAC 9823 Query 141070 ATAAAAACGAATAGCTTCCAATGCGTTGA 141098 |||||| |||| |||||| ||||| |||| Sbjct 9824 ATAAAAGCGAACAGCTTCTAATGCATTGA 9852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548128873888200