Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_013059.1 Length=40975 Score E Sequences producing significant alignments: (Bits) Value seq55999 113 1e-20 seq13154 102 2e-17 >seq55999 Length=1557 Score = 113 bits (124), Expect = 1e-20 Identities = 187/267 (70%), Gaps = 11/267 (4%) Strand=Plus/Minus Query 33939 TACGGCATCCAGTTATTCATCATCGACAGCCTCATGAAGTGCGGGATTGGCGATGACGAT 33998 |||| | || || | || ||||||||| ||||||| ||| || | | || || ||| Sbjct 1481 TACGACGTCAAGCTGTTTATCATCGACTCGCTCATGATGTGTGGCTTAAGTGAAGAGGAT 1422 Query 33999 TACAACGGGCAAAAGGCGTTTGTTGACGCGCTGTGCGACTTCAAGAATAAAACCAAC-TC 34057 |||| ||| ||||| | || | || || |||||||| ||||| || || | || Sbjct 1421 TACACCGGTCAAAAAGAATTCATAGAAGCCCTGTGCGAGTTCAA-----AACCCGTCATC 1367 Query 34058 T----CACATTATCCTCGTCACTCACTCCAGAAAGGGAGACAGCGAGGAGAAACCTACCG 34113 || ||| | || || || ||| |||||||| || | ||| || |||||| | Sbjct 1366 CGGTGCATATTTTGCTGGTAACACACCCCAGAAAGCTTGAGAACGAAGAAAAACCTGTGG 1307 Query 34114 GAAAGATGGACGTAAAAGGCTCAGGAGCGATTACAGACCTGACAGATAACCTATTTATCA 34173 | || |||||||| |||||| | || || || || || | || ||||||||| | | || Sbjct 1306 GTAAAATGGACGTGAAAGGCACCGGCGCCATCACCGATTTAACCGATAACCTACTGACCA 1247 Query 34174 TCTGGCGCAATAAAGCTCGCGAGAGAG 34200 |||||||||||||| ||||| |||| Sbjct 1246 TCTGGCGCAATAAAAAGCGCGA-AGAG 1221 >seq13154 Length=83798 Score = 102 bits (112), Expect = 2e-17 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 25488 TCAGTGGTGTAGCGGTCTTGCCCTGTCTGGTCTTGCCACTTTC-TGGTTCTCAGCATTCC 25546 ||||| |||||||| || || || | || |||||||| || | || || | || | || Sbjct 29341 TCAGTTGTGTAGCGATCCTGACCGTTTTGATCTTGCCATTTGCGTGTTTGTAAGG-TCCC 29399 Query 25547 CTCGAAATAAACCTGATCACCTTTTTTCACATACTGCCCTACGACTTCAGCAAGTTTCCC 25606 |||| ||||||||| || ||| || ||| | | | |||||||| | ||| || Sbjct 29400 TTCGATATAAACCTGCGATCCCTTTCGCAAATATTCTTTTGCCACTTCAGCTATTTTACC 29459 Query 25607 AACTACGGCAACACGATGCCATTCAGTCTGCTCCTTTTGTTCGCCAGTCTGTTTATCTCG 25666 | | | |||||||||||||| |||| ||||||| |||||||||| |||||||| || Sbjct 29460 GAACAAAACGACACGATGCCATTCTGTCTTCTCCTTTGGTTCGCCAGTTTGTTTATCGCG 29519 Query 25667 CCA 25669 ||| Sbjct 29520 CCA 29522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130910749379930