Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq17432 122 2e-22 seq669 122 2e-22 seq214 100 7e-16 >seq17432 Length=31749 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||||||||||||||| | || ||||||| | || | || ||||| || || Sbjct 24796 TGAAGAGTCGACTCCTTTTGAATATTATAGTCAGAGAGTGTTCGGCCGTCTTCTAGTTGT 24737 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||||||||| |||||||| || |||||| ||| || ||| |||||||| || Sbjct 24736 TTGCCGGCGAAGATAAGACGCTGTTGATCCGGAGGAATACCCTCTTTGTCCTGAATTTTC 24677 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||||||| || | |||||| | | || || ||||| ||||| ||||| || || Sbjct 24676 GCCTTCACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTTTCCGGTC 24617 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | ||||| || || ||||| Sbjct 24616 AATGTTTTGACGAATATTTG 24597 Score = 113 bits (124), Expect = 1e-19 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || |||||||||||||| | |||||||| | | ||| | || |||||||| || Sbjct 25024 TGAAGGGTCGACTCCTTTTGAATATTGTAGTCGGAAAGAGTGCGCCCGTCTTCCAGTTGT 24965 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || |||||||| | || ||||| |||||| ||| |||||| || |||||||| Sbjct 24964 TTGCCAGCGAAGATCAATCGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTGAATCTTA 24905 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || |||| |||||| | | || || ||||| ||||| ||||| || || Sbjct 24904 GCCTTTACATTCTCGATGGTGTCCGACGGCTCCACTTCCAAAGTGATGGTCTTTCCGGTC 24845 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | || ||||| || ||||| Sbjct 24844 AATGTCTTCACGAATATTTG 24825 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || ||||||||||| | |||||| || | | ||| | || ||||| || || Sbjct 23948 TGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCTTCTAGTTGT 23889 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || ||||| || | ||| ||||| ||| || || ||| ||||||||||| Sbjct 23888 TTGCCCGCAAAGATCAGTCTCTGTTGGTCGGGAGGGATGCCCTCTTTGTCCTGAATCTTG 23829 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||||||| || | |||||| | | || || || | || || || || || || Sbjct 23828 GCCTTCACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTAATGGTTTTTCCGGTC 23769 Query 199607 AGAGTTTTCACAAAAATTTGGTACATTTT 199635 | |||||||| |||||||| |||||| Sbjct 23768 AACGTTTTCACGAAAATTTG---CATTTT 23743 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||||||||||||||| | || || |||| | || | || ||||| || || Sbjct 24340 TGAAGAGTCGACTCCTTTTGAATATTATAATCAGAGAGTGTTCGGCCGTCTTCTAGTTGT 24281 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || ||||| || | ||| || |||||| ||| |||||| || || || || Sbjct 24280 TTGCCCGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTCTTTGTCTTGGATTTTG 24221 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| || | |||||| | | || || ||||| || || ||||| || || Sbjct 24220 GCCTTTACGTTCTCAATGGTGTCCGACGGCTCCACTTCCAAAGTAATTGTCTTTCCGGTC 24161 Query 199607 AGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || Sbjct 24160 AGAGTCTTGACGAATATCTG 24141 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || |||||||||||||| | ||| || || | | ||| | || ||||||| ||| Sbjct 24568 TGAAGGGTCGACTCCTTTTGAATGTTATAATCGGAAAGAGTGCGCCCGTCTTCCAACTGT 24509 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||||||||| || | || ||||| ||| || |||||| || || || || Sbjct 24508 TTGCCGGCGAAGATCAGTCTTTGTTGGTCGGGAGGGATGCCTTCTTTATCTTGGATTTTG 24449 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| || | |||||| | | || || || | || || || || || || Sbjct 24448 GCCTTAACGTTCTCAATGGTGTCGGAGGGCTCCACCTCAAGGGTTATGGTTTTTCCGGTC 24389 Query 199607 AGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| ||||| Sbjct 24388 AGAGTCTTAACAAAGATTTG 24369 >seq669 Length=42814 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||||||||||||||| || | |||||| |||| | ||| | || || || | ||| Sbjct 31639 TGGAGAGTCGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCTAACTGT 31698 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || ||||| || | ||| || |||||| ||| ||||| |||||||||||| Sbjct 31699 TTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATACCTTCCTTGTCCTGAATCTTT 31758 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||||||| ||||| ||| || | | || || ||||| || || ||||| || ||| Sbjct 31759 GCCTTCACGTTTTCGATGGTATCCGAAGCCTCCACTTCCAAAGTAATGGTCTTTCCGGTG 31818 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || Sbjct 31819 AGGGTCTTCACGAATATCTG 31838 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | || || || ||||| ||||||| |||||| |||| | ||| | || || Sbjct 31858 AGGACTAAATGAAGGGTTGACTCTTTTTGGATGTTGTAATCAGAGAGAGTGCGGCCGTCC 31917 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | ||| || || || ||||| || | ||| || |||||| ||| ||||| ||| Sbjct 31918 TCTAACTGTTTGCCCGCAAAGATAAGTCTCTGTTGATCCGGAGGAATGCCTTCCTTGTCC 31977 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| ||| ||| ||||| ||| || | | || || ||||| || || ||| Sbjct 31978 TGAATCTTTGCCTTAACGTTTTCGATGGTATCGGAGGCCTCCACTTCCAAAGTAATTGTC 32037 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| |||||||| || ||||| Sbjct 32038 TTTCCGGTGAGGGTTTTCACGAATATTTG 32066 Score = 118 bits (130), Expect = 2e-21 Identities = 152/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || |||||||| || | |||||| |||| | ||| | ||| ||||| | ||| Sbjct 32321 TGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGTCCGTCTTCTAACTGT 32380 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || || || | | |||||| |||||| ||| |||||| |||||||||||| Sbjct 32381 TTGCCCGCAAATATCAATCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGAATCTTT 32440 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || ||||| ||||| | | || || || | ||||| ||||| || ||| Sbjct 32441 GCCTTTACATTTTCGATAGTGTCAGAGGGCTCGACCTCAAGAGTGATAGTCTTTCCGGTG 32500 Query 199607 AGAGTTTTCACAAAAATTTGGTACATTTT 199635 || ||||||||||| ||||| |||||| Sbjct 32501 AGGGTTTTCACAAATATTTG---CATTTT 32526 >seq214 Length=17119 Score = 100 bits (110), Expect = 7e-16 Identities = 159/225 (71%), Gaps = 5/225 (2%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAA-AGTCCT 199470 |||||||| || | || || |||||||||||||||| |||||| || || || ||| || Sbjct 965 AGTCTCAGCACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATC-GCTAAGAGTTCT 1023 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 || ||||| | || || || || ||||| | |||||||| |||||| || || || Sbjct 1024 GCCGTCTTCTAATTGTTTGCCAGCAAAGATCAACCGCTGCTGATCCGGAGGTATGCCCTC 1083 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 |||||||||||| ||| || || | || || | | || || || | || Sbjct 1084 CTTGTCCTGAATCTTTGCCTTTACATTCTCAATAGTATCGCTGGGCTCCACCTCAAGAGT 1143 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||| ||||||||||| | || || || || ||||| |||||| Sbjct 1144 GATGGTCTTACCCGTCAACGTCTTGACGAAGATTTG---CATTTT 1185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178070512550115