Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq17432 158 1e-33 seq669 145 8e-30 seq214 123 2e-23 >seq17432 Length=31749 Score = 158 bits (174), Expect = 1e-33 Identities = 175/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||||| |||||| | || || |||||||| ||| | || || ||| || Sbjct 23743 AAAATGCAAATTTTCGTGAAAACGTTGACCGGAAAAACCATTACCCTTGAGGTGGAGCCC 23802 Query 38301 ACCGACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | || |||| | || | || || | ||||||||||| || || |||| Sbjct 23803 TCCGACACCATTGAGAACG-TGAAGGCCAAGATTCAGGACAAAGAGGGCATCCCTCCCGA 23861 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||| | || || | ||||||||||| || || |||| ||||| ||| ||| || Sbjct 23862 CCAACAGAGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGCACTCTCTCCGATTA 23921 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| |||||||| | || || |||||||| || ||| ||||||| || Sbjct 23922 CAACATTCAAAAGGAGTCAACCCTTCATTTGGTACTCCGTCTGAGAGGAGG 23972 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || || || || |||||||| ||| | || || ||| || | Sbjct 24365 AATGCAAATCTTTGTTAAGACTCTGACCGGAAAAACCATAACCCTTGAGGTGGAGCCCTC 24424 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||||| | | | |||| |||| | ||||||| || ||||| || || || |||||| Sbjct 24425 CGACACCATTGAGAACG-TTAAGGCCAAAATCCAAGATAAAGAAGGCATCCCTCCCGACC 24483 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| | || || | ||| ||||||||| |||| |||| |||||| || ||| || | Sbjct 24484 AACAAAGACTGATCTTCGCCGGCAAACAGTTGGAAGACGGGCGCACTCTTTCCGATTATA 24543 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| |||||||| |||| || |||||||| || ||||||||||| || Sbjct 24544 ACATTCAAAAGGAGTCGACCCTTCATTTGGTACTCCGTTTGAGAGGAGG 24592 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||||||||| ||||| | || || || |||||||| | || || ||| | | Sbjct 24593 AATGCAAATATTCGTCAAAACATTGACCGGAAAGACCATCACTTTGGAAGTGGAGCCGTC 24652 Query 38303 CGACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || |||| | || | ||||| | ||||||||||| ||||| | || | Sbjct 24653 GGACACCATTGAGAACG-TGAAGGCGAAAATTCAGGACAAAGAGGGTATTCCTCCGGATC 24711 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || || | ||| |||||||| || || |||| || || ||| ||||| | Sbjct 24712 AACAGCGTCTTATCTTCGCCGGCAAACAACTAGAAGACGGCCGAACACTCTCTGACTATA 24771 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || |||||||| |||| || |||||||| || ||| ||||||| || Sbjct 24772 ATATTCAAAAGGAGTCGACTCTTCATTTGGTACTCCGTCTGAGAGGAGG 24820 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||||||||| || || | || || || |||||||| | || || ||| | | Sbjct 24821 AATGCAAATATTCGTGAAGACATTGACCGGAAAGACCATCACTTTGGAAGTGGAGCCGTC 24880 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | | || | || || | |||||||| || ||||| | || || Sbjct 24881 GGACACCATCGAGAATGTAAAGGCTAAGATTCAAGACAAAGAAGGGATTCCTCCGGATCA 24940 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || | || | ||| |||||||| ||||| |||| |||||| || ||||||||| Sbjct 24941 GCAACGATTGATCTTCGCTGGCAAACAACTGGAAGACGGGCGCACTCTTTCCGACTACAA 25000 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || |||||||| |||| || ||||||||||| || | ||||| || Sbjct 25001 TATTCAAAAGGAGTCGACCCTTCATTTGGTGCTTCGACTCAGAGGAGG 25048 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| |||||||| || || || || || || || || || | || || ||| | | Sbjct 24137 AATGCAGATATTCGTCAAGACTCTGACCGGAAAGACAATTACTTTGGAAGTGGAGCCGTC 24196 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || | ||||||| |||||||| || ||||| | || | Sbjct 24197 GGACACCATTGAGAACG-TAAAGGCCAAAATCCAAGACAAAGAAGGTATTCCTCCGGATC 24255 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||| | || || | ||||||||||| || || |||| || || ||| || || | Sbjct 24256 AACAGAGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGAACACTCTCTGATTATA 24315 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || |||||||| |||| || |||||||| || ||| ||||||| || Sbjct 24316 ATATTCAAAAGGAGTCGACTCTTCATTTGGTACTCCGTCTGAGAGGAGG 24364 >seq669 Length=42814 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||||||||| ||||| ||||| || || || || || | || || |||||| | Sbjct 32070 AATGCAAATATTCGTGAAAACCCTCACCGGAAAGACAATTACTTTGGAAGTGGAGGCCTC 32011 Query 38303 CGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||| | | | | ||||| |||| | ||| || | ||||| || || ||||| | || | Sbjct 32010 CGATACCATCGAAAACG-TTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGATC 31952 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||| | || || | |||||||||||| | || |||| ||||| ||| || |||| Sbjct 31951 AACAGAGACTTATCTTTGCGGGCAAACAGTTAGAGGACGGCCGCACTCTCTCTGATTACA 31892 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||| || | || || ||||| || || ||||||||||| || Sbjct 31891 ACATCCAAAAAGAGTCAACCCTTCATTTAGTCCTTCGTTTGAGAGGAGG 31843 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| |||||||| || || ||||| || || ||||| || | || || ||||| | Sbjct 31842 AATGCAGATATTCGTGAAGACCCTCACCGGAAAGACCATTACTTTGGAAGTGGAGGCTTC 31783 Query 38303 CGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | ||||| | || | ||| || | ||||| || || ||||| | || | Sbjct 31782 GGATACCATCGAAAACG-TGAAGGCAAAGATTCAGGACAAGGAAGGTATTCCTCCGGATC 31724 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||| | || || | |||||||||||| | || |||| ||||| ||| || |||| Sbjct 31723 AACAGAGACTTATCTTTGCGGGCAAACAGTTAGAGGACGGCCGCACTCTCTCTGATTACA 31664 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| || ||||| |||| || |||||||| || ||||||||||| || Sbjct 31663 ACATTCAGAAGGAGTCGACTCTCCATTTGGTTCTTCGTTTGAGAGGAGG 31615 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||||||||| || ||||| ||||| || || || ||||| | || |||||| || Sbjct 32526 AAAATGCAAATATTTGTGAAAACCCTCACCGGAAAGACTATCACTCTTGAGGTCGAGCCC 32467 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | ||| | || | ||| || | |||||||| || ||||| | || Sbjct 32466 TCTGACACTATCGAAAATGTAAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCGGAT 32407 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||| | | || | |||||||||||| | || |||| ||||| ||| || ||| Sbjct 32406 CAGCAGAGATTGATATTTGCGGGCAAACAGTTAGAAGACGGACGCACTCTCTCTGATTAC 32347 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||||| | || || ||||| || || ||||||||||| || Sbjct 32346 AACATTCAGAAGGAGTCAACCCTTCATTTAGTTCTTCGTTTGAGAGGAGG 32297 >seq214 Length=17119 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||||| || ||| | ||||| || |||||||| | || || ||| || Sbjct 1185 AAAATGCAAATCTTCGTCAAGACGTTGACGGGTAAGACCATCACTCTTGAGGTGGAGCCC 1126 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | ||| | | | | | || | ||| || | ||||| ||||| || || | || Sbjct 1125 AGCGATACTATTGAGAATGTAAAGGCAAAGATTCAGGACAAGGAGGGCATACCTCCGGAT 1066 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || |||||| | || | || |||||||| | || |||| | || || | ||| ||| Sbjct 1065 CAGCAGCGGTTGATCTTTGCTGGCAAACAATTAGAAGACGGCAGAACTCTTAGCGATTAC 1006 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||||||| |||| || |||||||||||| | ||||||| ||| Sbjct 1005 AACATCCAAAAGGAGTCGACCCTTCATTTGGTGCTGAGACTGAGAGGAGGC 955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499820522044800