Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq54669 138 2e-27 >seq54669 Length=12211 Score = 138 bits (152), Expect = 2e-27 Identities = 298/445 (67%), Gaps = 3/445 (1%) Strand=Plus/Plus Query 129005 GAACGTC---TGGACTGAACAAGGTAATATAGTCGTCGTTTTTCAACCGTTCTAACATCA 129061 ||||||| |||||| || | || || | |||| ||| || || | |||| | Sbjct 11767 GAACGTCAGATGGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAA 11826 Query 129062 GCTTATTGATTTGGATACCGTAGTCAAGATGTCGGATTCGGTTTTCTTCAACGCCCTTGT 129121 ||||| ||||| | ||||| || | ||| || | || || |||||||| || || Sbjct 11827 ATTTATTAATTTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGT 11886 Query 129122 TATTCTTGAGCACAAGGATTTTTTCAACTTCGAGGTGCCACATTGGGTAATATAGAGTTG 129181 |||| || | || | | ||||| | || | ||||||| || || ||| |||| Sbjct 11887 TATTTTTTAATACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTG 11946 Query 129182 CGGCACCGCCGCGAACACCACCCTGTGAACAGCTCTTTACCGCAGTCTGGAAGTATTTCC 129241 | ||||| || || ||||| || || ||||| |||||||||||||| |||| ||| Sbjct 11947 CTGCACCACCACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTAT 12006 Query 129242 AAAATGGGATAATACCGGTATGTCGCACTTCACCGCTACGAATGCGAGATCCCTCGGCAC 129301 |||| || ||| ||||||||| ||||||| |||||| | | || | |||| Sbjct 12007 AAAACGGAATACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCAC 12066 Query 129302 GAATCGCACCGCCGTTGATGCCGATACCAGCGCGTTTGCTGATATAGTCAACGATAGAAC 129361 | || ||| | || || || || || ||||| | | ||| | | ||| | | Sbjct 12067 GGATGCGACCAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGCGC 12126 Query 129362 TAGCGGTAGCGTTGATGCTATCCAGTTCGTCTCCACATTCGATCTTGACACAAGAGCTAA 129421 | || || || ||||| ||||| ||| |||||||| ||| ||||||||||||| Sbjct 12127 TTGCTGTGGCATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAA 12186 Query 129422 ACTGCCGAGTCGGGGTGCGAACACC 129446 | || || || || || || ||||| Sbjct 12187 ATTGGCGGGTAGGCGTACGTACACC 12211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720221981133600