Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_014661.1 Length=164093 Score E Sequences producing significant alignments: (Bits) Value seq54669 123 3e-23 >seq54669 Length=12211 Score = 123 bits (136), Expect = 3e-23 Identities = 293/439 (67%), Gaps = 8/439 (2%) Strand=Plus/Plus Query 141401 TGGACTGAACAAAGTAATGTAGTCGTTATTGATATAACGCTCAATAAGTAACTCATTGAT 141460 |||||| || | ||| || | ||||| || | |||||| | | || | ||| || Sbjct 11777 TGGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAAT 11836 Query 141461 TTGAAGGCCATAATCCATGTGACGAATACGGTTTTCTTCAACACCTTTGTTGTTCTTCAA 141520 ||| | || |||||||| || |||| ||| || ||||||||||| ||| || || || Sbjct 11837 TTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAA 11896 Query 141521 CACAATCAAGTTTTCCACTTCAAGGTGCCACATAGGGAAGAACATTGTTGCCGAACCTTT 141580 || | || ||||| | || | ||||||| || || || | ||||| | ||| Sbjct 11897 TACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACC 11956 Query 141581 ACGAATACCACCTTGAGAACAGCAATGAACCGCTGAGTTAAAGTGCTTCCAGAAAGGTAC 141640 ||| | ||| ||||||||||| | | ||||| | | |||||| || | ||| | | Sbjct 11957 ACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATA-AAACGGAA 12015 Query 141641 TAC-GCCAGTGTGTTTGACTTCGCCTGGGCCAATTTTCGAACCTTCAGCTCGAATCATGC 141699 ||| || || || |||| || | | |||| ||||| || || || | Sbjct 12016 TACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACGGATGCGAC 12075 Query 141700 CTGCGTTAATCCCGATACCTGCTCGCTTAGAAACATACTTAACAATAGCAGAGTTTGC-- 141757 | || ||||| || || || || |||| |||||||| || | || || | |||| Sbjct 12076 CAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGC---GCTTGCTG 12132 Query 141758 -ATCATTGATTGAGTCAAGGCTGTCACCAGATTCAATAACTACACATGAACTGAATTGAC 141816 ||||||| || || | ||||| ||| |||| || | |||||| || || ||||| | Sbjct 12133 TGGCATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAAATTGGC 12192 Query 141817 GAGTTGGGGTACGAACACC 141835 | || || ||||| ||||| Sbjct 12193 GGGTAGGCGTACGTACACC 12211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524599857348600