Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_014663.1 Length=169947 Score E Sequences producing significant alignments: (Bits) Value seq54669 95.1 1e-14 >seq54669 Length=12211 Score = 95.1 bits (104), Expect = 1e-14 Identities = 260/395 (66%), Gaps = 10/395 (3%) Strand=Plus/Plus Query 147741 CATAAGATTGTTCAATTGAATTCCATAGTCCATGTGACGGATACGGTTTTCTTCAATACC 147800 ||||| || || | ||| | || || ||||| || || | ||| || ||||||| ||| Sbjct 11822 CATAAATTTATTAATTTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACC 11881 Query 147801 TTTGTTGTTCTTGAGAACCATCAAGTTCTCACATTCAAGGTGCCAAATCGGCCAGTAGCA 147860 ||| || || | |||| || || || || | ||||| | || | | | Sbjct 11882 ACGGTTATTTTTTAATACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAA 11941 Query 147861 AGTTGCCGAACCTTTACGAATACCACCCTGTGAACAAGAGTGTACAGCAGCATTTTTAAG 147920 ||||| | ||| ||| | ||| || || |||||||| | ||| |||| | | ||| Sbjct 11942 CGTTGCTGCACCACCACGCACACCTCCTTGAGAACAAGATTTTACCGCAG--TCTGAAAG 11999 Query 147921 T--TTCCAGAATGGTGTAACACCGGTGTGCTTAACTTCACCAGGACCAATCTTAGAACCT 147978 | || | || || || |||||| || | |||||||| ||| ||| | |||| Sbjct 12000 TGTTTATAAAACGGAATACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCT 12059 Query 147979 TCAGCTCGGATTGCTCCTCCACTGATGCCAATACCTGCTCGTTTAGACACATATTTTACA 148038 | || ||||| || || | || ||||| || || || | || |||||||||| Sbjct 12060 TGCGCACGGATGCGACCAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATG 12119 Query 148039 ATAGC---TGATGTGGTTTCAGTAATTGATTCTAAATCGTCGCCAGTTTCAATCAATACA 148095 || || || ||||| || | || || || ||| ||| ||| ||| ||||||||| Sbjct 12120 ATTGCGCTTGCTGTGG---CATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACA 12176 Query 148096 CACGAACTGAATTGACGTGTTGGAGTCCGGACACC 148130 || || || ||||| || || || || || ||||| Sbjct 12177 CAAGAGCTAAATTGGCGGGTAGGCGTACGTACACC 12211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543319463603400