Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq11840 118 1e-21 >seq11840 Length=1854 Score = 118 bits (130), Expect = 1e-21 Identities = 457/705 (65%), Gaps = 36/705 (5%) Strand=Plus/Minus Query 112329 TACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCC 112388 || ||||| ||| || | |||| |||||| | |||||||| || ||| | || Sbjct 1417 TATAAAGATCACTGCAATCGAAAGTCAAATCAACAAAATTTGGGAACCATTAAGTGCTCG 1358 Query 112389 AACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTC 112448 ||| | || |||||||| | || | | ||||||||||| || || || || | Sbjct 1357 AACTTATGCACAGAAATAATTGAGTACTCGTCCAAAGATGAGATCGCAGTCTGCAATTTG 1298 Query 112449 GCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA--------GACATTTGATT 112500 || ||||| ||| | || | ||| | ||||| | | || |||| Sbjct 1297 GCGTCAATTGCTTTG---AA-----TCGATTCGTCAACAAAAGGGAGCTGTCCTTCGATT 1246 Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560 || |||||| | ||||| | ||| | |||||| ||| || || | | | ||||| Sbjct 1245 TTGCGAAACTCAAAGAAGTGGCTAAAGTTATCACAAGAAATCTCAATAAAATCATTGACC 1186 Query 112561 GAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 || | || || || || || | || ||||||| ||||||||| || || | Sbjct 1185 TTAACTACTATCCTGTGCCGGAAACAGAGCGC---TCTAATAAGAGACACCGACCCATCG 1129 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGA-TGTATTCATTCTTTGTCGCCACGCATTTGAT--T 112674 || | || || || ||| | || || ||| || |||||| || || | ||||| | Sbjct 1128 GTATTGGAGTTCAGGGTTTGGCCGACTGTTTT-ATTCTTATGCGTCAGCCCTTTGAAAGT 1070 Query 112675 CCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734 || |||||||| | | ||| | || |||||||| || ||| ||| |||| | | Sbjct 1069 CCA--GAAGCGAAACGACTTAATATCCAGATTTTTGAGACCATATATTACGGCGCTTTGG 1012 Query 112735 AGGCGAGTTCGGAGTTGGC-AGAG-GTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792 |||| |||| || ||||| | || |||| || || ||||| || | ||| ||||| || Sbjct 1011 AGGCCAGTTGTGAATTGGCTAAAGAGTTG--GGACCTTATGAGACATATGAAGGTTCGCC 954 Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACG- 112851 | || |||| | ||||||| ||||||||||| | | |||| || ||| | Sbjct 953 GGTCTCTAAAGGTATTCTTCAATACGATATGTGGGACCG-AACGCCAA-CTGAACTCTGG 896 Query 112852 -ACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 | |||| || || |||||| ||| | | || | ||||| |||||| | || Sbjct 895 AATTGGGCCGAACTTAAGGAAAAGATCGCCAAATATGGAGTACGTAATAGTCTTACGTTG 836 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || || ||||| || || || || ||||| || || || || ||||| | | || ||| Sbjct 835 GCTCCGATGCCGACCGCTTCTACGGCACAGATATTAGGCAACAATGAGTCGATAGAGCCC 776 Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 113015 ||||| | || || ||| | || |||| | ||||||||| Sbjct 775 TACACTAGTAATATATATTCCCGTCGAGTCCTCTCCGGAGAGTTT 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620305203368400