Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_015296.1 Length=157061 Score E Sequences producing significant alignments: (Bits) Value seq54669 111 2e-19 seq11509 87.8 2e-12 seq4872 87.8 2e-12 >seq54669 Length=12211 Score = 111 bits (122), Expect = 2e-19 Identities = 251/372 (67%), Gaps = 8/372 (2%) Strand=Plus/Plus Query 54226 CCATAGTCGATACGGCGTTCACGGTTCTCTTCAAGACCACGGTTGTTCTTCAGGACCACA 54285 || || || ||| |||| |||| || ||||||| ||||||||| || || | |||| Sbjct 11844 CCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAATACCAAC 11903 Query 54286 ACATCATCAAATTGATAATGCCAGATAGGGATATAGCAAGTTGCTGATCCGCCACGAATA 54345 | || || | | ||||||| | || | | | | ||||||| || ||||| | | Sbjct 11904 AGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACCACGCACA 11963 Query 54346 CCGCCTTGAGAGCAAGACTTTAATGCCCCAGTCAGATATT--TTATGAAA-GGAACCAGG 54402 || |||||||| ||||| |||| || ||||| || | | |||| ||| |||| Sbjct 11964 CCTCCTTGAGAACAAGATTTTA---CCGCAGTCTGAAAGTGTTTATAAAACGGAATACAA 12020 Query 54403 CCTGTGTGCACCATTTCACCTTTTCGGATAGGGCTACCGATGC-CACGAATTGCTCCAAC 54461 || || || | |||||| | || || ||||| ||| |||| || ||| | Sbjct 12021 CCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCT-TGCGCACGGATGCGACCAGC 12079 Query 54462 ATCAAATCCGATCCCAGCGCGTTTGGATACATAATCAACAATACTTTTGGCTGTAGCATT 54521 || || || ||||| ||||| | || ||||| | | || | ||||| ||||| Sbjct 12080 ATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGCGCTTGCTGTGGCATT 12139 Query 54522 GATTGAGTCCAAAGTGTCACCGGTTTTGATAAGAACACAAGAACTGAATTGGCGGGTTGG 54581 ||| || |||||| |||| || || || | |||||||| || ||||||||||| || Sbjct 12140 GATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAAATTGGCGGGTAGG 12199 Query 54582 GGTACGAACGCC 54593 ||||| || || Sbjct 12200 CGTACGTACACC 12211 >seq11509 Length=51200 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 137231 GGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 137289 |||||| ||||||||| |||||||||| ||||||||||||| | |||||||||||| | Sbjct 31927 GGCCCCTTAGCTCAGTTGGTTAGAGCAAGCGACTCATAATCGCTGGGTCGCTGGTTCGAA 31986 Query 137290 TCCAGCCAGGGTCACCAA 137307 |||||| ||| |||||| Sbjct 31987 TCCAGCAGGGGCCACCAA 32004 >seq4872 Length=25388 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 137631 TGTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGC 137690 ||||||||||| |||||||||| ||||||||||||| |||||||| ||||| ||||| || Sbjct 1016 TGTAGTTCAGTTGGTAGAACGGCGGACTGTTAATCCGTATGTCGCTGGTTCGAGTCCAGC 1075 Query 137691 CATCGTCGCCAAATTG 137706 || | ||||| ||| Sbjct 1076 CAGAGGAGCCAACTTG 1091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502113306070200