Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq14363 98.7 1e-15 >seq14363 Length=9417 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 34903 AATATTACCTCTGTAATCCCTATCTATAACACCTCCACCTATATCAATGTATTTATTCAA 34962 || ||| |||||| | || | |||||||| || |||| |||||||| | | |||| | Sbjct 448 AACATTCCCTCTGAAGTCTCGGTCTATAACTCCCGCACCAATATCAATAAAATGATTCCA 507 Query 34963 AGACAAACCTGATCTTGCAGCTATCCTACCATAACATCCTTCTGGTATATCAAACATAAT 35022 || | ||||||| || ||||| | ||||||||||||| ||| ||| |||| | || Sbjct 508 AGCTAGTCCTGATCGTGGTGCTATTCGGCCATAACATCCTTGTGGAATAACAAATTTGAT 567 Query 35023 ATCTGTTTTCACTAGTATTCTTTTTAGTGGGCTT----ATTTCATAATCGTATGCACTAT 35078 ||| ||| ||| ||| | |||| | | || || || ||| |||| | || Sbjct 568 ATCGGTTACCACAAGT----TGTTTACCGTGTTTTGGAATAACACAATAATATGGAGAAT 623 Query 35079 AAAGATCAAACCCAGCTGAACCAGGAGTTGATTTTGTAGG 35118 |||| ||| | ||||||||||| || | || ||||| || Sbjct 624 AAAGGTCATAACCAGCTGAACCTGGCGATGCCTTTGTTGG 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591899623873800