Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq54669 104 2e-17 >seq54669 Length=12211 Score = 104 bits (114), Expect = 2e-17 Identities = 259/390 (66%), Gaps = 5/390 (1%) Strand=Plus/Plus Query 141804 TAAATTGTTTAATT-GAATACCATAATCCATATGACGAATACGGTTTTCTTCAATGCCCT 141862 |||||| |||||| | | || ||||||||||| |||| ||| || ||||||| || Sbjct 11824 TAAATTTATTAATTTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCAC 11883 Query 141863 TATTGTTCTTAAGAACCATAAGGTTTTCACATTCTAAATGCCAAATAGGCCAGTACGCAG 141922 || || || | |||| || ||||| ||||||||||| | || | | | Sbjct 11884 GGTTATTTTTTAATACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACG 11943 Query 141923 TAGCAGAACCTTTACGAATACCACCTTGAGAACATGAATGGACCGCTGCATTTTTAAGT- 141981 | || | ||| ||| | ||| ||||||||||| || | ||||| | | | |||| Sbjct 11944 TTGCTGCACCACCACGCACACCTCCTTGAGAACAAGATTTTACCGCAG--TCTGAAAGTG 12001 Query 141982 -TTCCAAAATGGTGTTACACCAGTGTGTTTAACTTCACCTGGACCAATTTTAGACCCTTC 142040 || |||| || | ||| || || | ||||||| ||| |||| | |||| Sbjct 12002 TTTATAAAACGGAATACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTG 12061 Query 142041 GGCACGGATTGCACCACCGCCGATACCAATACCAGCACGTTTAGAAACATATTTTACAAT 142100 |||||||| |||| | |||||||| || || || | ||||||||||||| || Sbjct 12062 CGCACGGATGCGACCAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGAT 12121 Query 142101 AGCTGATGTACTTTCAGTAATTGAATCTAGGCTATCGCCGGTTTCAATTAAAACACATGA 142160 || || | || | || ||||| | || || || ||| || || ||||| || Sbjct 12122 TGCGCTTGCTGTGGCATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGA 12181 Query 142161 ACTAAATTGACGAGTTGGGGTACGAACACC 142190 |||||||| || || || ||||| ||||| Sbjct 12182 GCTAAATTGGCGGGTAGGCGTACGTACACC 12211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532894810991400