Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq54669 327 8e-85 seq9107 159 2e-34 >seq54669 Length=12211 Score = 327 bits (362), Expect = 8e-85 Identities = 1043/1599 (65%), Gaps = 50/1599 (3%) Strand=Plus/Minus Query 71176 GGTGTACGTACTCCAACAAGACAATTTAGTAGTTGTGTAAAGATTGACAGTGGCGATAGC 71235 ||||||||||| || || | |||||||| ||||||| ||| || |||| || || Sbjct 12211 GGTGTACGTACGCCTACCCGCCAATTTAGCTCTTGTGTATTGATAGAATGTGGGGACAGT 12152 Query 71236 CTAGATTCAATTAATGCCTCTTCAAGTTCAATTGTTAAGTATGTATCCAAACGTGCAGGT 71295 | ||||| || |||||| | |||| |||| | || ||||| || | || || || Sbjct 12151 TTGGATTCTATCAATGCCACAGCAAGCGCAATCATAAAATATGTTTCGCAGCGCGCGGGG 12092 Query 71296 ATCGGTATCAATGTTGGCAAAATTCGTGCATTAGGAAGTCCTATACGCAATGGTGAAGCA 71355 || ||||| |||| ||| || ||||| ||| ||| || || |||||||||| Sbjct 12091 ATTGGTATTAATGCTGGTCGCATCCGTGCGCAAGGTAGTGGAATTCGTCATGGTGAAGCT 12032 Query 71356 GTTCATACTGGTTTAATACCATTCTTAAAGCATTTCCAAACAGCAGTCAAATCTTGCTCT 71415 ||||||| |||| || || || | || || || || || || || |||||||| ||| Sbjct 12031 TTTCATACCGGTTGTATTCCGTTTTATAAACACTTTCAGACTGCGGTAAAATCTTGTTCT 11972 Query 71416 CAGGGAGGCTTACGTGGTGGTGCTGCTACAGCGTTCTACCCTATGTGGCATTTAGAAGTT 71475 || ||||| | ||||||||||| || || || | || ||||||||||||| | Sbjct 11971 CAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTTTTTCCCCTGTGGCATTTAGAGATA 11912 Query 71476 GAAAGCCTTTTAGTATTGAAAAATAACAAAGGTGTTGAAGATAACCGTGTACGTCATTTA 71535 |||| || || ||||| ||||||||| |||||||||||||| ||||| || ||| | Sbjct 11911 GAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTTGAAGATAATCGTGTTCGCCATATG 11852 Query 71536 GACTATGCTGTGCAATTCAATAAGCTTATGTACCAACGATTGATTACAGGTGGCAATATT 71595 || || | || ||| | ||||| ||||||| || || || | | | | | || Sbjct 11851 GATTACGGGGTACAAATTAATAAATTTATGTATCAGCGTTTAGTAAAAAACGAAGAGATA 11792 Query 71596 ACATTGTTCTCACCTAATGCAGTTGAAGGTTTATATGACTCATTCTTTGCCGACCAAGAT 71655 || | || || || ||| ||||||||||| | |||||||| || ||| || Sbjct 11791 ACTCTATTTAGTCCATCTGACGTTCCGGGTTTATATGAAGCTTTCTTTGCTGATCAAAAT 11732 Query 71656 AAGTTTGAAAAGTTATATACTGAAGCTGAAGGTAATCC--TATGATTATCCAAAAGTCAG 71713 | ||| | ||| || ||| | || | || | | |||||| Sbjct 11731 GAATTTTCTCGTCTGTATGAACAATATGA--GCAAGACAGTACCACTCGCCAAAAACGTA 11674 Query 71714 TAAAAGCTAGTGACTTATTTACATTGTT--TG-CACAAGAGCGAGCAGGTACAGGTCGTA 71770 | | || || |||||| ||| | || ||||||||||| ||| || |||| Sbjct 11673 TTAGGGCGGTGGATTTATTT---TTGCTCATGATGCAAGAGCGAGCTTCTACTGGCCGTA 11617 Query 71771 TCTATCTTCAAAACGTAGATCACTGTAATACCAATAGCCCATTTATT--GCAGAAGTTGC 71828 | ||| |||| |||| ||||| ||||| ||| |||| || |||| | ||||| |||| Sbjct 11616 TTTATATTCAGCACGTCGATCATTGTAACACCCATAGTCCGTTTAATCCGCAGA--TTGC 11559 Query 71829 CCCTATTCGTATGAGTAACTTATGCCTTGAAATTGCATTACCAACTGAACCTATGCAGGA 71888 || | ||| ||| ||||| | ||||| || | || ||| || | | || Sbjct 11558 ACCAGTACGTCAATCTAATTTATGTTTGGAAATAGCTCTCCCTACTACTCCACTTAATGA 11499 Query 71889 TATTAATAAGCCTGAAGGTGAAATTGCATTATGTACATTAGCTGCATTCAATCTTGGTGC 71948 |||||| | | |||||||| ||| | || || || |||| ||||||||||||| Sbjct 11498 TATTAACGATAGCAAGGGTGAAATCGCACTCTGCACTCTATCTGCGTTCAATCTTGGTG- 11440 Query 71949 CATTAAAGATTTAGGTCGTATGGAAAAATTATCCGAATTAGTTAT-TAGA--------GC 71999 ||| |||| | | || ||||| || ||| || | || || Sbjct 11439 --TTATTGATTCA------CTAAAAGAATTAGAAGAGCTAGCCATCTTGACGGTGCGTGC 11388 Query 72000 ATTAGATGCTTTACTTGATTACCAAGATTATCCAATACTAGCTGCTGAAAATGCTACCAA 72059 | ||||| ||| | ||||| ||||| ||||| || || || |||| | | | Sbjct 11387 GCTTGATGCGTTATTAGATTATCAAGACTATCCTATCAACGCCGCGAAAAAAGGGGCGAT 11328 Query 72060 GCGAAGACGTACTTTAGGTGTTGGCATTATTAATTATGCTCATCACTTAGCTAAAAATGG 72119 | | | ||| ||||||| || || | ||||| | |||| || | || || ||||| | Sbjct 11327 GGGTCGCCGTGCTTTAGGAGTAGGTGTGATTAACTTTGCTTATTATTTGGCAAAAAACGC 11268 Query 72120 TGTTAAATATTCTGATGGCAGTGCCAACAATTTAACTCATGA-ACTCTTCGAAAGTTTTC 72178 ||| ||||||||||| || || || ||| |||| ||| | ||| || ||| | | Sbjct 11267 TGTGCGTTATTCTGATGGTAGCGCTAATAATCTAACCCATAACACT-TTTGAAGCGATGC 11209 Query 72179 AGTATTACCTATTGAAAGCAAGTTGTGATTTAGCCAAAGAACAAGGCGCTTGTCCTGCAT 72238 | ||||| |||| || ||| | | || |||| ||| || ||||| | Sbjct 11208 AATATTATTTATTAAAGGCATCAAACAACCTGGCGCGCGAACGAGGGGCCTGTCCCTTGT 11149 Query 72239 TCCATGAGACAACTTATTCACAGGGTATATTACCTATTGACCGCTATAATAAGTCAGTAG 72298 | |||| || || ||| |||| ||||| || ||||| || ||||| | | || | Sbjct 11148 TTAATGAAACCACCTATGCACAAGGTATTTTGCCTATCGATACTTATAAAAGGGACGTCG 11089 Query 72299 ATGGTATTCATAGTGAAGAGTTA-CATCTTCCG--TGGGAGCAATTGAGAGAAGATATTT 72355 ||| ||| | || | ||| | | || || ||||| ||| | | |||||| Sbjct 11088 ATGCTAT---TTGTCAGGAGCCATTGTATTGCGACTGGGAAACATTACGTCAGGATATTG 11032 Query 72356 TGAAATACGGTTTACGTAATTCTACTGTATCCTCATTGATGCCAAGTGAAACAAGTTCTC 72415 | ||||| || |||| ||||| || | || | | ||||| ||||| ||||| Sbjct 11031 TAAAATATGGACTACGCAATTCAACCCTTTCTGCCCTCATGCCTTCGGAAACCTCTTCTC 10972 Query 72416 AGGTATCTAATGCAACAAATGGTATTGAACCACCTCGCGGTTTAATGAGCATTAAAGCAA 72475 | | |||||||| || || || || |||||||| || |||| | ||||| ||||| Sbjct 10971 AAATTTCTAATGCTACTAACGGGATAGAACCACCACGTGGTTATGTAAGCATCAAAGCTT 10912 Query 72476 GTAAAGATGGTATCTTGAAGCAAGTAGTACCTCATATTGGTACAATGGCT----AATGAC 72531 ||||||||| || ||| ||||| ||||| | || | ||| ||| |||| | Sbjct 10911 CTAAAGATGGAATTTTGCGTCAAGTGGTACCAGA-ATATGAACA---GCTAAAAAATGCC 10856 Query 72532 TATGAATTGTTGTGGAATATTCCAAGCAATAATGGCTATATTGAATTAGTTGCAATCATG 72591 ||||| ||||| ||| | || || | || || || ||| | ||||||||| | ||| Sbjct 10855 TATGAGTTGTTATGGGACATCCCTAATAACAAAGGGTATTTGCAATTAGTTGGTTTGATG 10796 Query 72592 CAAAAGTTTGTCGATCAGGCAATCTCTGCGAACACAAATTATGACCCTACTA-AATTCGC 72650 ||||| ||||| ||||| | || ||||| || || | ||||| || | || || | Sbjct 10795 CAAAAATTTGTTGATCAATCTATTTCTGCTAATACTCACTATGATCC-ATTATGTTTTCC 10737 Query 72651 AAATGGCAAAGTCCCAGTTAAGCAAATTCTTAAAGATTTAATACGAGGCTATAAGCTTGG 72710 | |||||| | | || ||| | || | ||||| | | | ||||| || || Sbjct 10736 GGGTAACAAAGTGACGATAAAACAATTAATTGAGGATTTGCTGCTCGCTTATAAACTGGG 10677 Query 72711 TGTTAAAACATTCTATTACCATAACACCCGTGATGGTGC 72749 |||| || | ||||| || || |||||||| || || Sbjct 10676 AATTAAGACGCTGTATTATCACAATACCCGTGACGGCGC 10638 Score = 187 bits (206), Expect = 2e-42 Identities = 689/1063 (65%), Gaps = 50/1063 (5%) Strand=Plus/Minus Query 72884 ATGTTCTTAGGTCAACATGTAAACGTATCTCGGTACGACCAACAAAAGCTTAGTGCATTT 72943 ||||| || ||||| | |||||||| || || | || || ||||| | || ||| Sbjct 10402 ATGTTTTTTGGTCAGCCAGTAAACGTCTCACGCTTTGATCAGCAAAAACATATCATGTTT 10343 Query 72944 GAAAAATTAATAGAAAAACAATTGAGCTTCTTTTGGCGACCTGATGAAATAGATGTATCA 73003 |||||||| || |||||||| | ||| |||||||| || || || || ||||| || Sbjct 10342 GAAAAATTGATTGAAAAACAGCTTTCCTTTTTTTGGCGGCCGGAAGAGATTGATGTTGCA 10283 Query 73004 A-------AA--GACCGTTCTGATTGGCAAAAAATGACTGACTCTGAAAAGCATATTTTC 73054 || ||| | ||| || | |||| |||||| ||||||| Sbjct 10282 CGTGATAGAATCGACTATGCTGCTTTAC---------CTGAGCATGAAAAAAATATTTTT 10232 Query 73055 ATATCAAATCTTAAATACCAAACATTGCTTGATAGCATGGCTGCACGTTCTGTTAATATG 73114 || ||| | ||||| ||||| || | ||| || | ||| ||| || Sbjct 10231 ATTAGTAATTTAAAATATCAAACCCTGTTAGATTCAATCCAGGGACGCAGCCCTAACATT 10172 Query 73115 GTATTACTTCCACTTGTATCTTTACCTGAAGTTGAAACATGGATTGAAACATGGGCATTT 73174 | ||| | ||| | | ||| | |||||| | ||||| ||| | || || ||| ||||| Sbjct 10171 GCTTTATTACCATTAATTTCTATTCCTGAACTGGAAACTTGGGTGGAGACCTGGTCATTT 10112 Query 73175 AGTGAAACTATTCACTCTCGCTCATATACTCATATCTTGCGTAACCTTTTCGTAGATCCA 73234 ||| || | || ||||| || ||||| ||||| | ||||| || || ||||| Sbjct 10111 TTTGAGACCTTACATTCTCGTTCTTATACGCATATTATTCGTAATATTGTCAACGATCCT 10052 Query 73235 AGTGAAGTATTTGATGATATTACAATTAACCCTGAAATATTAAAACGTGCTGAAAG--TA 73292 | |||||||| |||||| | ||| | ||||| |||||||| || |||| || Sbjct 10051 TCGGTGGTATTTGAGGATATTGTCACTAATCAAGAAATCTTAAAACGGGC--AAAGGATA 9994 Query 73293 TCGCCAAATACTTTGATGATGTGATACTGACAACTCAGT----TCATTCAATCTCAAGGT 73348 | | |||| |||| | |||| || ||| | | ||||| | | ||| Sbjct 9993 TTTCTGCTTACTATGATCTTCTGATTGAGATGACTAATTATTATCATTTATT----AGGA 9938 Query 73349 GAAGGTACTTATCAGGTCAATGGT-GAA-GAGTAT-GT-AGTCTCAAAGCGTAAGCTTAA 73404 || ||| ||| | |||||| ||| || || || ||| | | || | || Sbjct 9937 GAGGGTTGCCATCTAATAAATGGTAGAACGATTACCGTCAGTTTA----CCTACATTAAA 9882 Query 73405 AGAGCGACTTTATCT-TGCCGTTTGTGCTGTCAATGCCTTAGAAGCTATCCGCTTTTACG 73463 | ||| || ||| | || | || | ||||||||| ||||||||| | |||||||| | Sbjct 9881 AAAGCAGCTGTATTTATGTCTGATGAG-TGTCAATGCATTAGAAGCTGTTCGCTTTTATG 9823 Query 73464 TAAGTTTCGCATGTTCATTTGCTTTTGCAGAACGTGAGCTACTTGAAGGTAATGCCAAGA 73523 | ||||| || ||||| ||||||||||| |||||||| || | ||||||||||| || | Sbjct 9822 TGAGTTTTGCCTGTTCGTTTGCTTTTGCTGAACGTGAATTAATGGAAGGTAATGCTAAAA 9763 Query 73524 TTATTAAACTAATCGCCCGTGATGAAGCCTTGCACTTAACTGGTACTCAGATGATTCTGA 73583 |||| || | ||||| ||||||||||| | || | | || || ||| ||| | Sbjct 9762 TTATCAAGTTGATCGCTCGTGATGAAGCGCTACATCTTGCCGGAACACAGCATATTTT-- 9705 Query 73584 ATAACTG--GCGAACTGGCAAGGATGATCCTGAAATGCAAGAGATTGCAGAAGACCTTAA 73641 ||| || ||| | ||||| |||||| |||||| ||| ||||| | | || Sbjct 9704 ATATTTGATGCGTTCCGGCAATGATGATTTAGAAATGGTAGAAATTGCTCA--TCATTGC 9647 Query 73642 AGATGTAAGTCTTAAGATCTTTATGGAT--GTTGTTGAAGAAGAAAAGCAATGGGCAAAA 73699 | | | ||| ||| | | | | | | || | || || | ||||| || Sbjct 9646 CAACAACAATGTTACGATTTATTCGTCTCGGCAGCACAACAGGAGAAAGATTGGGCGGAA 9587 Query 73700 TATCTATTCAAAGATGGGTCAATGATCGGTCTTAATGAAGAAATACTTTGCCAGTACGTT 73759 ||| |||| ||||| || ||||| || || ||| |||| || ||||| |||||| || Sbjct 9586 TATTTATTTCGCGATGGTTCTATGATTGGACTGAATAAAGACATTCTTTGTCAGTACATT 9527 Query 73760 GAGTACATTGCTAATCATCGTTTACATAGC-CTAGGCTTTGAAAAACCATTTGATATTAA 73818 || |||||| | ||| ||| | || ||| | || || | | ||| ||| || Sbjct 9526 GAATACATTACCAATATCCGTATGCA-AGCTGTGGGGTTAGCAGCACCTTTTAGCATCCG 9468 Query 73819 GTCTAATCCTATTCCGTGGATTAGCTCTTATCTAACAAGTGATAATGTGCAAGTTGCACC 73878 | ||| || ||||| ||||| | | | ||| | ||||| || |||||||| || Sbjct 9467 TTTTAACCCGATTCCCTGGATAAATGCCTGGCTAGTATCCGATAACGTTCAAGTTGCGCC 9408 Query 73879 TCAAGAAACTGAAATTACATCGTACTTAGTTGGTCAAGTTGAC 73921 ||||||| || ||| || ||||| || || ||| ||||| Sbjct 9407 TCAAGAAGTAGAGGTTAGTTCTTACTTGGTGGGACAAATTGAC 9365 >seq9107 Length=87930 Score = 159 bits (176), Expect = 2e-34 Identities = 204/281 (73%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 70552 GTAACAAAACGTGATGGTGGATTAGCACCTTTGGATTTAGATAAGATCCATAAAGTAATC 70611 || || ||||||||||| | || || | || | ||||| || || ||||| ||| Sbjct 642 GTTACCAAACGTGATGGCCGCAAAGAACGCATTAATCTGGATAAAATTCACAAAGTTATC 583 Query 70612 GCATGGGCTGCAGAGGGACTTGAAAATGTCTCAGTATCTCAAGTTGAATTGAAATCTCAT 70671 ||||||||||| || || ||||| || ||||| ||||| |||||| || || Sbjct 582 AACTGGGCTGCAGAAGGCCTAAGGAATGTGTCGGTATCCCAAGTAGAATTGCGTTCACAG 523 Query 70672 ATCCAATTTTATGAAGGTATGAAGACAGAAGATATTCACGAAATAATCATTAAAGCAGCA 70731 || ||||||||||| || || || || || || || |||| |||||||||||||| Sbjct 522 ATTCAATTTTATGATGGCATAAAAACCTCTGACATCCATGAAACTATCATTAAAGCAGCT 463 Query 70732 GCAGATTTAATATCGGTTGACACTCCTGATTATCAGTATCTCTCATCTCGTTTAGCCGTA 70791 ||||||||||| || | | || |||||||| ||||| || | || |||||| | Sbjct 462 GCAGATTTAATTTCCTCTACTGCACCAGATTATCAATATCTAGCAGCCCGGTTAGCCATT 403 Query 70792 TTTCATTTACGTAAACAAGCCTATGGTGATTTTGTACCACC 70832 ||||||||||| ||| | || |||||| | |||| |||||| Sbjct 402 TTTCATTTACGAAAAAAGGCTTATGGTCAATTTGAACCACC 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335439893562865