Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq55999 111 5e-20 >seq55999 Length=1557 Score = 111 bits (122), Expect = 5e-20 Identities = 198/284 (70%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 40288 TTCACATACGCCAGAAGACGCTACGGCATCCAGTTATTCATCATCGACAGCCTCATGAAG 40347 ||||| |||||| | || |||| | || || | || ||||||||| ||||||| | Sbjct 1501 TTCAC-TACGCCCACAAACATTACGACGTCAAGCTGTTTATCATCGACTCGCTCATGATG 1443 Query 40348 TGCGGTATTGGCGATGACGATTACAACGGACAAAAGGCGTTTGTTGACGCGTTGTGCGAC 40407 || || | | || || ||||||| ||| ||||| | || | || || ||||||| Sbjct 1442 TGTGGCTTAAGTGAAGAGGATTACACCGGTCAAAAAGAATTCATAGAAGCCCTGTGCGAG 1383 Query 40408 TTCAAGAATAAAACAAACTCT-CACATTATCCTCGTCACTCACTCCAGAAAGGGAGACAG 40466 ||||| || || | | || ||| | || || || ||| |||||||| || | Sbjct 1382 TTCAA-AACCCGTCATCCGGTGCATATTTTGCTGGTAACACACCCCAGAAAGCTTGAGAA 1324 Query 40467 CGAGGAGAAACCTACCGGAAAGATGGACGTAAAAGGCTCAGGAGCGATTACAGACCTGAC 40526 ||| || |||||| || || |||||||| |||||| | || || || || || | || Sbjct 1323 CGAAGAAAAACCTGTGGGTAAAATGGACGTGAAAGGCACCGGCGCCATCACCGATTTAAC 1264 Query 40527 AGATAACCTGTTTATCATCTGGCGCAATAAAGCTCGCGAGAGAG 40570 |||||||| | | |||||||||||||||| ||||| |||| Sbjct 1263 CGATAACCTACTGACCATCTGGCGCAATAAAAAGCGCGA-AGAG 1221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156944518603420