Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_018846.1 Length=60894 Score E Sequences producing significant alignments: (Bits) Value seq22457 143 1e-29 seq36628 114 5e-21 seq54883 113 2e-20 seq55168 111 6e-20 seq11509 100 1e-16 seq17369 96.9 1e-15 >seq22457 Length=815 Score = 143 bits (158), Expect = 1e-29 Identities = 211/299 (71%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 12602 AAATAGCAGTCTTCCAGTTTTTCGAACACTTCCCACGCCCGATCGGTTTCGAGCATTTTT 12661 ||||| || || || | ||||| || |||||||| || |||||||||| |||||||| Sbjct 339 AAATAACAATCCTCTAACTTTTCAAATACTTCCCATGCTTGATCGGTTTCTAGCATTTTG 398 Query 12662 GCGTGACGGGCTGCGCCGCGTTCTGTCCAGAGGATGAGGGAGCGAACGTTACGGGCGATT 12721 || ||||| |||||||||||||| ||||| |||| || || |||| ||| | ||| Sbjct 399 GCATGACGTGCTGCGCCGCGTTCAGTCCACAGGAAAAGCGAATGAACATTATCAGTTATT 458 Query 12722 TTCACAGAAGGTCTTAAAGACATGCTGTGCTTAAATTCCCGCAACTCCTCATTCTCAAGT 12781 |||||||| |||| ||| || |||||||||| |||| || ||| || ||| Sbjct 459 TTCACAGACCCTCTTTTAGAGGGTTTGCGCTTAAATTCACGCAGTTCTTCACCTTCTAGT 518 Query 12782 AAAAAGTAGTGCTTACCGATAACAAATCGTCCAGAATTCCGATTGAAATTTTTTCGGATG 12841 || | |||||||| | ||||| || | | ||| ||| |||||| || |||| Sbjct 519 TTGAAATGATGCTTACCAACGACAAACCGATCCGCATTACGAGAGAAATTATTGTGGATA 578 Query 12842 TAATCTGGTTCTGTGCCATATAAGCTGGCAAGAAGCTCTGTAGTCACCACAGGTATATT 12900 | | | | |||||||| || ||||| | |||||| |||| || || ||||| Sbjct 579 TTTTTAATTACCGTGCCATACAATTCAGCAAGCAACTCTGTTGTCATTACTGGAATATT 637 Score = 141 bits (156), Expect = 4e-29 Identities = 122/148 (82%), Gaps = 5/148 (3%) Strand=Plus/Plus Query 4632 TGAGTTGACTGGTCATGATGAC--CTCCTTTGAAGTTTTAGTTAGCAATCACCAGTTAGT 4689 ||| |||| | | ||||||| ||||||| |||||||| | | | ||||| ||| Sbjct 670 TGATTTGAGTCGCCATGATGGGTGCTCCTTTTGTGTTTTAGT--GTCAGCGCCAGTCAGT 727 Query 4690 GGCTGGTGATCGGGTGTCAACTAGAGCCTTCAAAGATGCTCCGGGCATATTCCCCTTGCG 4749 ||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 728 AGCTGGTGC-CGGGTGTCAACTGGAGCCACAAAAGATGCTCCGGGCATATTCCCCTTGCG 786 Query 4750 GGTATTGTATTACGCCTCTCCACCCGAC 4777 ||| |||||||||||||||||||||||| Sbjct 787 GGTCTTGTATTACGCCTCTCCACCCGAC 814 >seq36628 Length=791 Score = 114 bits (126), Expect = 5e-21 Identities = 86/101 (85%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 12600 TGAAATAGCAGTCTTCCAGTTTTTCGAACACTTCCCACGCCCGATCGGTTTCGAGCATTT 12659 ||||||| || ||||| | ||||||||||||||||| ||| ||| |||||| ||||||| Sbjct 477 TGAAATAACAATCTTCTAACTTTTCGAACACTTCCCATGCCTGATTGGTTTCTAGCATTT 536 Query 12660 TTGCGTGACGGGCTGCGCCGCGTTCTGTCCAGAGGATGAGG 12700 | | |||||| |||||||| |||||||||||||| || ||| Sbjct 537 TGGTGTGACGTGCTGCGCCTCGTTCTGTCCAGAGAATAAGG 577 >seq54883 Length=869 Score = 113 bits (124), Expect = 2e-20 Identities = 103/125 (82%), Gaps = 4/125 (3%) Strand=Plus/Plus Query 4654 CTCCTTTGAAGTTTTAGT-TAGCAATCACCAGTTAGTGGCTGGTGATCGGGTGTCAACTA 4712 ||||| || ||||||| | |||| || || ||| |||| | ||||||||||||| Sbjct 747 CTCCTATGGTTTTTTAGTATGGCAACCAGT-GTCAGTAACTGGCGC-CGGGTGTCAACTA 804 Query 4713 GAGCCTTCAAAGATGCTCCGGGCATATTCCCCTTGCGGGTATTGTATTACGCCTCTCCAC 4772 |||| || ||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 805 GAGCAC-CATAGACGCTCCGGGCATATTCCCCTTGCGGGTCTTGTATTACGCCTCTCCAC 863 Query 4773 CCGAC 4777 ||||| Sbjct 864 CCGAC 868 >seq55168 Length=2163 Score = 111 bits (122), Expect = 6e-20 Identities = 384/581 (66%), Gaps = 35/581 (6%) Strand=Plus/Minus Query 12597 GACTGAAATAGCAGTCTTCCAGTTTTTCGAACACTTCCCACGCCCGATCGGTTTCGAGCA 12656 || ||||||| || ||||| | ||||||||||||||||| || |||||||||| |||| Sbjct 2075 GATTGAAATAACAATCTTCTAACTTTTCGAACACTTCCCAAGCTTGATCGGTTTCTAGCA 2016 Query 12657 TTTTTGCGTGACGGGCTGCGCCGCGTTCTGTCCAGAGGATGAGGGAGCGAACGTTACGGG 12716 |||| || || || ||||| | ||| | ||||| || || || ||||| || ||| Sbjct 2015 TTTTGGCATGGCGTGCTGCCTCACGTCCGGTCCACAGAATAAGTGAGCGTGTTTTGTGGG 1956 Query 12717 CGATTTTCACAGAAGGTCTTAAAGACATGCTGTGCTTAAATT----CCCGCAACTCCTCA 12772 |||| | || |||||||||||| || | ||||| |||| | ||| Sbjct 1955 AAATTTGTA---AATGTCTTAAAGACA--CT---CGCAAATTATTAACCGCCTCGCCTAC 1904 Query 12773 TTCTCAAGTAAAAAGTAGTGCTTACCGATAACAAATCGTCCAGAATTCCGATTGAAATTT 12832 | || ||||| ||||| ||| | || || | | | ||| ||||| ||| Sbjct 1903 TACT---TTAAAA--TAGTGTTTATCCTCAATGAACCTATCTGTATTGCGATTATGGTTT 1849 Query 12833 TTTCGGATGTAATCTGGTTCTGTGCCATATAAGCTGGCAAGAAGCTCTGTAGTCACCACA 12892 || || || | | |||||||| ||||| | | || | | ||| || || | || Sbjct 1848 TTGCGAATACGAGCAGGTTCTGTACCATACAGTTTAGCTAACAACTCAGTGGTGATTACC 1789 Query 12893 GGTATATTACTAAATGAAATTATGGAGAGGGACTC--CACGGAGATG-GTTTTCATGCTT 12949 || || || || | ||| | || || || | | | || | |||| || Sbjct 1788 GGAATTCTATTATGCGTAATGACAGAAAGTTTTTCGATATAGCGCTGCATAGTCATTTTT 1729 Query 12950 TGCGTCCTACTTGATATTTTGATTTACCCCTT-TTGAGAGGGTGACCGGGCGC-TCAAAA 13007 ||||||||||| || ||||| || || || | || | |||| | | || | Sbjct 1728 ACATTCCTACTTGATTGTTCAATTTATCCATTATTTTAATGGAGGTCGGGTACTTGAACA 1669 Query 13008 CCGCAAGTAGTCGGCGGGCA-TATTCCCATTGCTGGTATTGTATTAGCCGCACG---CCC 13063 || ||||||| ||| ||| | ||||| || ||||||||| | | || || ||| Sbjct 1668 CCTCAAGTAGAAGGCCAGCAGTTTTCCCCTTTTGGGTATTGTA-TCCCTGCTCGCTACCC 1610 Query 13064 GGTCATAAACCAAGAAGACTGGACACaaaaaaaCCGCATGTCTGTCGGGCGCGGTAACCG 13123 | ||||| || | |||| ||||||||||||| || |||||||||||| ||| Sbjct 1609 GACCATAA--CA--ATCTATGGATGTAAAAAAACCGCATTACTTTCGGGCGCGGTATCCG 1554 Query 13124 CTACTTGCTAAGGTGTTTTGAGCACCATGAGGCAGAATATA 13164 ||||||| ||||||| || |||||| || ||| ||||||| Sbjct 1553 CTACTTG--AAGGTGTGTTCAGCACC-TGCGGC-GAATATA 1517 >seq11509 Length=51200 Score = 100 bits (110), Expect = 1e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 23592 GGCCCTTTAGCTCAGT-GGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAA 23650 ||||| |||||||||| ||| ||||| |||||||||||||||| |||||||||||| || Sbjct 31927 GGCCCCTTAGCTCAGTTGGTTAGAGCAAGCGACTCATAATCGCTGGGTCGCTGGTTCGAA 31986 Query 23651 TCCAGCAAGGGCCACCA 23667 ||||||| ||||||||| Sbjct 31987 TCCAGCAGGGGCCACCA 32003 >seq17369 Length=1302 Score = 96.9 bits (106), Expect = 1e-15 Identities = 190/278 (68%), Gaps = 10/278 (4%) Strand=Plus/Minus Query 13534 TTCCATGCGATCGAATTCAGCAATGTAGGCTTCCTTGAATGCAGCTGCTTTTTTGCCGGT 13593 ||||||||||| ||||||||||| || ||||| || ||| |||||| |||||||||| Sbjct 463 TTCCATGCGATTAAATTCAGCAATATAAGCTTCTTTAAATCGTGCTGCTATTTTGCCGGT 404 Query 13594 GAAGCCCATCACCAGAAAAACGAAGCCGTTTTTGGTGATTTGGTACATTGGGCGTTGTTC 13653 || ||||| ||||| || | ||| || | |||||| || || ||| | | | Sbjct 403 AAATCCCATAACCAGGAAGATGAAACCATCTTTGGTCATAACATAATATGGTTGGGGCTT 344 Query 13654 GCC--TTTG-GCGTCGGTGT-----AGGTAACGTCCTCAAAATTGAGGGCGTTAAATTTC 13705 ||| |||| || ||| || || | |||||||||||| | ||||||| Sbjct 343 GCCGTTTTGTAATTCATTGTTTTTATGGCAAAG--CTCAAAATTGAGCTCTGTAAATTTA 286 Query 13706 TCTGAGCATTCAATATTTGCAATGGCGCGCAATACGTTATCGTGTCGCTTGCAAAAATAT 13765 | |||||||||| |||| || |||| ||| || | ||| || ||||||| Sbjct 285 GCGGAGCATTCAAGCCCATCAATAGCACGCATTACATTCTTGTGCAATTTTTTAAAATAT 226 Query 13766 TCGGCAACGGCAAAGGACGTAGTAACAGCGCGACCATT 13803 | || |||||||| || || ||||| | |||||| Sbjct 225 TTTGCTACGGCAAACGAAGTGCTAACAACCTTACCATT 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194608900609840