Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq381 116 5e-21 >seq381 Length=38394 Score = 116 bits (128), Expect = 5e-21 Identities = 336/497 (68%), Gaps = 30/497 (6%) Strand=Plus/Minus Query 197119 CCCGTTCTCTTTCCCA--CCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGC 197176 || ||||||||||| || || | | |||||||| |||||||||||||||||||| | Sbjct 29642 CCAGTTCTCTTTCCTCTGCCACGAT--ATCCTCCGATGACCACCAGATCCAGAGTGTCTC 29585 Query 197177 ACACCCCTTCCATGTAATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCT 197236 || ||||||| || |||||||| ||||| ||||| | |||||| || || || | Sbjct 29584 CGACTCCTTCCAAATAGTCTTTCTTGAGTTTAAGCCATTTGTGAGATCTTTTTGCGATTT 29525 Query 197237 CGTAGGTTGCGTTTACGTCCAGGGTCTTGATCATCAATCCCTCGCAATCTTCC--TTCAC 197294 | || | |||| | || | ||||| | ||||| ||||||||| ||||| || | Sbjct 29524 CATAACTGGCGTCGATATCTAATGTCTTAACCATCAGTCCCTCGCA--CTTCCCTTTTAT 29467 Query 197295 GGCCTTGTTCATGAAAGT-TTGAATGTCTTCCGGTTTGT-TAGACATCAT---ATCTCGC 197349 || | | |||| |||| | || || || || | | || | |||||||| || ||| Sbjct 29466 GGAC-TCTTCAAGAAATTCCTGTATTTCATC--GATGGTATTGACATCATTCGAT-TCG- 29412 Query 197350 GCGAAGATAAATTGTCCCTCCAC---CTCCGTAAAACAACTCCTCATAAGTTCCCTCCTC 197406 || || | || | ||||| ||| || || || || | | | || || || || Sbjct 29411 GCAAAAGTGAACTCTCCCT-CACGTTCTTCGAAATGCA--TTTTTAAGAGATCTCTTCTT 29355 Query 197407 TCTCTGAAGCTCTTGT-TGACCTGAGACACTCCGTTCATGTACAACACGTCAAAAGCAAA 197465 | ||| ||| || | | || |||| |||||||| ||||||| || || ||| | Sbjct 29354 TTGCTG-AGCGGTTCTGTTACTAAAGACTGTCCGTTCAGATACAACAAATCGAACGCATA 29296 Query 197466 GACGCACACCTGGACGGTTATCTCTTCTTCCTTGACATCTTTACGTTTTCTGGTCGCCAG 197525 || || ||||||| | || || |||| ||| |||||||| | || ||| Sbjct 29295 GAGACAGACCTGGATCTTAATATCCGAATCCTCTGCATTCTTACGTTTACGTGTACTCAG 29236 Query 197526 CTTTTGAAAGGGAAGGATCTGCTTC--TTCTCAACGTCCCAAGCAACTGCCTCAGCGTCC 197583 | ||||||||||| ||||| ||| || || | ||||| ||||| || ||| || Sbjct 29235 TATCTGAAAGGGAAGAATCTGTTTCTGTTGTCGA--TCCCACGCAACGGCTTCACAATCA 29178 Query 197584 AAGATGAAAGACTTCAC 197600 | ||| ||| ||| || Sbjct 29177 ATGATAAAACTCTTGAC 29161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676252970883600