Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_019399.1 Length=167396 Score E Sequences producing significant alignments: (Bits) Value seq54669 138 1e-27 seq13760 95.1 1e-14 >seq54669 Length=12211 Score = 138 bits (152), Expect = 1e-27 Identities = 235/338 (70%), Gaps = 2/338 (1%) Strand=Plus/Plus Query 138478 GGACTGAACAAAGTAATGTAATCATTCTTTCCGAATCGTTCCATCATTAGGTCATTCAGT 138537 ||||| || | ||| || | || || ||| | || || | ||| | | ||| | | Sbjct 11778 GGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAATT 11837 Query 138538 TGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 138597 || || || ||||||||||| || | ||| || ||||| || || ||||||||| || Sbjct 11838 TGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAAT 11897 Query 138598 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 138657 || | |||||||| | || |||||||| | ||| || | || || || || ||| Sbjct 11898 ACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACCA 11957 Query 138658 CGAATTCCACCCTGTGAGCATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAATA 138717 || | || || || || || ||||| || ||||||||||| ||||| |||| |||||| Sbjct 11958 CGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAATA 12017 Query 138718 ACACCAGTATGGCGTACTTCACCCATG-CCAATCTTAGAACCTTCAGCACGAATCATACC 138776 ||| ||||| ||||| ||||| | ||| | ||||| ||||| || ||| Sbjct 12018 CAACCGGTATGAAAAGCTTCA-CCATGACGAATTCCACTACCTTGCGCACGGATGCGACC 12076 Query 138777 AACGTTAATACCAATTCCAGCGCGTTTAGAGATATATT 138814 | | ||||||||||| || ||||| | || | ||||| Sbjct 12077 AGCATTAATACCAATCCCCGCGCGCTGCGAAACATATT 12114 Score = 82.4 bits (90), Expect = 8e-11 Identities = 109/149 (73%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 136443 AATATATTGGGTGCCTTTAAGGTGAAGCTGTTCATCGCGTGCAATGAACTTCATAATCTT 136502 ||||| || || || ||| || ||| |||||| || || || ||||| ||||| || Sbjct 9707 AATATGCTGTGTTCCGGCAAGATGTAGCGCTTCATCACGAGCGATCAACTTGATAATTTT 9766 Query 136503 GGCATTACCTTCCATGATTTCCATGTTCTTATGGAAGTTAAAGGTACATGCAAAAGATAC 136562 |||||||||||||| | || || |||| | || ||| | ||| |||||| || Sbjct 9767 AGCATTACCTTCCATTAATT-CACGTTC--AGCAAAAGCAAACGAACAGGCAAAACTCAC 9823 Query 136563 ATAAAAACGAATAGCTTCCAATGCGTTGA 136591 |||||| |||| |||||| ||||| |||| Sbjct 9824 ATAAAAGCGAACAGCTTCTAATGCATTGA 9852 >seq13760 Length=57140 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 68823 TTGGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTAATGCCA 68882 ||||||||| |||| ||||||||| ||||||||||| ||||||| |||||||||||||| Sbjct 18360 TTGGAGCGGGCAATGGGAATCGAACCCACATCATCAGCTTGGAAGGCTGAGGTAATGCCA 18301 Query 68883 TTATACGATATCCGC 68897 |||||| || |||| Sbjct 18300 TTATACCATGCCCGC 18286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535162013047200