Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq11454 84.2 6e-12 seq54883 82.4 2e-11 seq39681 82.4 2e-11 >seq11454 Length=2477 Score = 84.2 bits (92), Expect = 6e-12 Identities = 132/181 (73%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 34164 TTGGTGGTGAACTGTGCAGGGTTGGCGTAACCGGCTA-AAAGGACCCGGCGCACCTTTCG 34222 ||||||| ||||| |||||||| | |||||||| |||||||||||| ||||| || Sbjct 1612 TTGGTGGCAAACTGAACAGGGTTGACACTACCGGCTACAAAGGACCCGGCCAACCTTACG 1553 Query 34223 GTGCCCCCACACAGCCCACCATAATACGAATGTGGCCGTGCTATACGCATaaaaaaaC-C 34281 || ||||| |||| |||||| | | ||| ||| | || | ||| |||||||| | Sbjct 1552 GTTGCCCCATCCAGCTCACCATTGTTCCGATG-GGCAGGACT-CATGCACAAAAAAACAC 1495 Query 34282 GCTTGCGCGGTG-AATGCGCCTTT-TAGTAATCCGGGACGCCAATCCCGGCACTGGATTT 34339 ||| || ||| |||||||||| ||| | ||||| | ||| |||| || ||||| Sbjct 1494 GCTCTCGGCGTGCTATGCGCCTTTGTAGATACCCGGGGTGTCAAGCCCGACATCTGATTT 1435 Query 34340 T 34340 | Sbjct 1434 T 1434 >seq54883 Length=869 Score = 82.4 bits (90), Expect = 2e-11 Identities = 192/287 (67%), Gaps = 12/287 (4%) Strand=Plus/Plus Query 33811 GTAACCCATTTACGAAAGCGGTAGGGGATAGTGCCTGGTGTCACCGCATCGCGGCAGCGG 33870 ||||||||||| ||||| |||| || | ||||||||| |||||||||| |||| ||| Sbjct 432 GTAACCCATTTGCGAAAACGGTGAGGTAAAGTGCCTGGCTTCACCGCATCTCGGCTGCGA 491 Query 33871 AGGATCAGTGTGTAGAGGCCTGACTCGGAGATGATGATCGATTCTTGCTCACC---GCCA 33927 |||| || || | | ||| || || || || ||| | | ||| | || ||| Sbjct 492 AGGACAAGAGTAAACATGCCGGATTCAGAAATTATGCACATGTTCTGCGCCCCCTTGCCG 551 Query 33928 G---GGGTGTCGGTTGAAGCGACG---CCCTTCTCATCATCATCAAGTTTTCGAACAGCA 33981 | | | |||||| |||||| | ||| ||||||| ||| || || | ||| Sbjct 552 GCCTGACTCTCGGTTAAAGCGAGGGTCATCTTTTCATCATTATCCAGCTTATACAGCGCA 611 Query 33982 TCTCGATGGTTTGCTATGCCTATAGCCCGACAAACATCTGAAGCGATAAACCATGGCTCA 34041 ||| | || ||||| || ||| ||| | ||||| ||| |||||||| ||| Sbjct 612 TCTGTAACATTAGCTATTTTTAATGCCACACAGAGATCTGCAGCAATAAACCACACTTCA 671 Query 34042 CCATTAATGACGATTACCCGTATATCGGCTTGGGATTCGAAAGAAAA 34088 ||||||| | ||| | || || | | ||| ||| |||||||| Sbjct 672 CCATTAACAATGATAATACGGATTTGG---TGGTTTTCAAAAGAAAA 715 >seq39681 Length=3370 Score = 82.4 bits (90), Expect = 2e-11 Identities = 168/240 (70%), Gaps = 11/240 (5%) Strand=Plus/Minus Query 34110 TGTCATAGTG--GTTACCTTTTAGTCTGGTT-AATCACCACTACCGACGCCAATCGG--T 34164 |||||||||| ||| ||| |||| ||| ||||||| ||| | | |||| | Sbjct 2416 TGTCATAGTGATGTTCCCTGTTAGATTGGAAGAATCACCGCTAGAGGTTCTAATCTCAAT 2357 Query 34165 TGGTGGTGAACTGTGCAGGGTTGGCGTAACCGGCTAA-AAGGACCCGGCGCACCTTTCGG 34223 ||| || |||||| ||||||| | ||||||||| ||||||||||| ||||| ||| Sbjct 2356 TGGCGGCGAACTGAACAGGGTTAGAACTACCGGCTAACAAGGACCCGGCCAACCTTACGG 2297 Query 34224 TGCCCCCACACAGCCCACCATAATACGAATGTGGCCGTGCTATACGCATaaaaaaaC-CG 34282 | ||||| |||| |||||| | | | ||| || | | ||||||||||||| || Sbjct 2296 TTGCCCCATCCAGCTCACCATTGTTCTGA--TGGGCGAGGACTGCGCATAAAAAAACACG 2239 Query 34283 CTTGCGCGGTG-AATGCG-CCTTTTAGTAATCCGGGACGCCAATCCCGGCACTGGATTTT 34340 | || ||| ||||| ||| |||| | ||||| | ||||||| || |||||| Sbjct 2238 CGGTCGGCGTGTCATGCGCCCTGTTAGATACCCGGGGTTCTAATCCCGACATCTGATTTT 2179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143091393891940