Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_019503.1 Length=166499 Score E Sequences producing significant alignments: (Bits) Value seq54669 152 5e-32 seq13760 91.5 2e-13 >seq54669 Length=12211 Score = 152 bits (168), Expect = 5e-32 Identities = 236/337 (70%), Gaps = 0/337 (0%) Strand=Plus/Plus Query 138441 GGACTGAACAAAGTAATGTAATCATTCTTTCCGAATCGTTCCATCATTAGGTCATTCAGT 138500 ||||| || | ||| || | || || ||| | || || | ||| | | ||| | | Sbjct 11778 GGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAATT 11837 Query 138501 TGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACACCTTTGTTATTTTTCAAA 138560 || || || ||||||||||| || | ||| || ||||| ||||| ||||||||| || Sbjct 11838 TGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAAT 11897 Query 138561 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 138620 || | |||||||| | || |||||||| | ||| || | || || || || ||| Sbjct 11898 ACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACCA 11957 Query 138621 CGAATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATA 138680 || | || || || ||||| ||||| || ||||||||||| ||||| |||| |||||| Sbjct 11958 CGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATAAAACGGAATA 12017 Query 138681 ACACCAGTATGACGTACTTCACCTGTACCAATCTTAGAACCTTCGGCACGAATCATACCA 138740 ||| |||||| ||||||| || ||| | ||||| ||||| || |||| Sbjct 12018 CAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACGGATGCGACCA 12077 Query 138741 ACGTTAATACCAATTCCAGCGCGTTTGGAGATATATT 138777 | ||||||||||| || ||||| | || | ||||| Sbjct 12078 GCATTAATACCAATCCCCGCGCGCTGCGAAACATATT 12114 Score = 82.4 bits (90), Expect = 8e-11 Identities = 109/149 (73%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 136415 AATATATTGGGTGCCTTTAAGATGAAGCTGCTCATCACGTGCAATGAACTTCATAATCTT 136474 ||||| || || || |||||| ||| |||||||| || || ||||| ||||| || Sbjct 9707 AATATGCTGTGTTCCGGCAAGATGTAGCGCTTCATCACGAGCGATCAACTTGATAATTTT 9766 Query 136475 GGCATTACCTTCCATGATTTCCATGTTCTTATGGAAGTTAAAGGTACATGCGAAAGATAC 136534 |||||||||||||| | || || |||| | || ||| | ||| || ||| || Sbjct 9767 AGCATTACCTTCCATTAATT-CACGTTC--AGCAAAAGCAAACGAACAGGCAAAACTCAC 9823 Query 136535 ATAAAAACGAATAGCTTCCAATGCGTTGA 136563 |||||| |||| |||||| ||||| |||| Sbjct 9824 ATAAAAGCGAACAGCTTCTAATGCATTGA 9852 >seq13760 Length=57140 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 69635 TTGGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTAATACCA 69694 ||||||||| |||| ||||||||| ||||||||||| ||||||| |||||||||| ||| Sbjct 18360 TTGGAGCGGGCAATGGGAATCGAACCCACATCATCAGCTTGGAAGGCTGAGGTAATGCCA 18301 Query 69695 TTATACGATATCCGC 69709 |||||| || |||| Sbjct 18300 TTATACCATGCCCGC 18286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532293634705800