Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_019530.1 Length=157785 Score E Sequences producing significant alignments: (Bits) Value seq54669 104 2e-17 seq4872 87.8 2e-12 >seq54669 Length=12211 Score = 104 bits (114), Expect = 2e-17 Identities = 259/385 (67%), Gaps = 10/385 (3%) Strand=Plus/Plus Query 52664 TTAATCTGAATCCCATAGTCGATACGGCGTTCACGGTTCTCTTCCAATCCACGGTTGTTT 52723 ||||| || | ||| || || ||| |||| |||| || ||||| | |||||||| ||| Sbjct 11832 TTAATTTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTT 11891 Query 52724 TTGAGAACAACGACATCATCAAATTGATAATGCCAGATGGGAACATAGCATGTTGCCGAT 52783 || | || | | || || | | ||||||| | ||||| | | | ||||| | Sbjct 11892 TTTAATACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCA 11951 Query 52784 CCACCACGGATACCGCCTTGAGAGCAAGACTTCAGGGCACCAGTC--AAATACTTGATGA 52841 |||||||| | ||| |||||||| ||||| || | ||| ||| ||| || || | Sbjct 11952 CCACCACGCACACCTCCTTGAGAACAAGATTTTACCGCA---GTCTGAAAGTGTTTATAA 12008 Query 52842 AT-GGAACCAGACCTGTATGGACCATTTCCCCTTTACGGATAGGGCTACCGATGC-CACG 52899 | |||| ||| ||||| | ||| || | ||| || ||||| ||| |||| Sbjct 12009 AACGGAATACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCT-TGCGCACG 12067 Query 52900 AATTGCCCCAACATCGAATCCGATGCCAGCACGTTTGGAAACATAATCCACGAT-GCTTT 52958 || ||| ||| | || || || || || | |||||||| | | ||| || | Sbjct 12068 GATGCGACCAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGCGCT 12127 Query 52959 TCGCAGTGGCATTAATTGAGTCCAATGTATCACCAGTTTTGATCAATACACAAGAGCTGA 53018 | || |||||||| || || ||||| | || ||| || ||||||||||||||||| | Sbjct 12128 T-GCTGTGGCATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAA 12186 Query 53019 ACTGTCGGGTCGGGGTGCGGACGCC 53043 | || ||||| || || || || || Sbjct 12187 ATTGGCGGGTAGGCGTACGTACACC 12211 >seq4872 Length=25388 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 137811 TGTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGC 137870 ||||||||||| |||||||||| ||||||||||||| |||||||| ||||| ||||| || Sbjct 1016 TGTAGTTCAGTTGGTAGAACGGCGGACTGTTAATCCGTATGTCGCTGGTTCGAGTCCAGC 1075 Query 137871 CATCGTCGCCAAATTG 137886 || | ||||| ||| Sbjct 1076 CAGAGGAGCCAACTTG 1091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504428474319000