Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq4070 91.5 5e-14 >seq4070 Length=28035 Score = 91.5 bits (100), Expect = 5e-14 Identities = 497/785 (63%), Gaps = 20/785 (3%) Strand=Plus/Minus Query 45437 ATGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGAT 45496 |||||||||||| |||| || || || | | || | | || || ||| ||| Sbjct 7888 ATGAAACAATATTTAGATTTAATGAAAAAAGTATTGCATGAAGGTGTCATAAAATCCGAT 7829 Query 45497 CGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGAC 45556 || || |||||||| ||| ||| | || || || | || ||| |||| || Sbjct 7828 CGTACCGGAACAGGAACAAGGTCCATTTTTGGTTACCAAATACGTTTTGACTTACAACGG 7769 Query 45557 GGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTC 45616 || ||||| | || || || ||| | ||| | || || |||||||| || || | Sbjct 7768 GGTTTCCCATTAGTCACCACTAAACGCTGTCATTTTCGTTCTATCATTTACGAGCTCTTA 7709 Query 45617 TGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGG 45676 |||||| | | || ||| ||| | || || |||| |||| ||| | |||||| Sbjct 7708 TGGTTTCTCAGTGGTAGTACCAATATCGATTACTTACAGGCAAATGCTGTATCAATTTGG 7649 Query 45677 GACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCG 45736 | || ||||| ||| | ||||| || ||||| || || ||| |||||||| | Sbjct 7648 AATGAATGGGCAGATAGCGATGGCGAGCTTGGCCCCATATATGGCAAACAATGGCGCGCT 7589 Query 45737 TGGAAAGGGGCTGACGGG---AAAACGGTCGACCAAATTGCGGCG--GTCTTTAAGGAAA 45791 ||| ||| |||||||| |||| | || ||| | | || || || | ||| Sbjct 7588 TGGGAAGCAACTGACGGGCGGAAAA---TTGATCAACT--CAGCAATGTATTGACAGAAT 7534 Query 45792 TCAAGC-GCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTG 45850 | || | || || || || || ||| | |||| || ||||| || | | | | Sbjct 7533 TAAAACAGCGTCCAGAT-TCACGCCGGATCGTTGTTTCTGCTTGGAATGTAGGAGAAATA 7475 Query 45851 GGGGAAATGAAG-TTGCCCCCATGTCATTACGCCTTT---CAGTTTTACGTCGCGAATGG 45906 | | ||| |||||||| || || ||| ||| || || || || || || | Sbjct 7474 GATAACATGGCTCTTGCCCCC-TGCCA---CGCGTTTTTTCAATTCTATGTTGCCAACGA 7419 Query 45907 CCGGTTGTCATGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAA 45966 | | || ||| | |||||||| |||| |||||| || | |||||||| Sbjct 7418 CAAACTTTCCTGCCAACTTTACCAGCGTTCCTGCGATGTATTTCTTGGCCTACCGTTTAA 7359 Query 45967 CATCGCTAGCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTCGG 46026 || || ||||| || || || ||||| ||| | || || || |||||||| | || || Sbjct 7358 TATTGCAAGCTACGCCCTATTAACACAGATGATCGCTCAGCAGTGCGACCTAAAAGTAGG 7299 Query 46027 CGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAA 46086 || | |||| || || || || |||| | || |||||| | ||||| | Sbjct 7298 TGATTTTATTTGGACAGGAGGGGATATCCACATCTATTGTAATCATATAGAACAGACCCG 7239 Query 46087 ACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCCGCC 46146 |||| || || | | || || || |||| || || |||| || || ||||| | Sbjct 7238 TTTGCAACTAACCAGAAATCCACGTCCATTGCCCAATCTGCTGATTAAGCGTAAGCCAGC 7179 Query 46147 GTCTATCTTTGACTATGAATACGAGGATTTTGAATTTGTCGGCTATGACCCGCACCCGGC 46206 || | ||||| || ||| ||||||||||| | ||||| |||||| || || Sbjct 7178 TTCACTATTTGAGTACCAATTTGAGGATTTTGATATCACAGGCTACTGCCCGCATCCTGC 7119 Query 46207 GATTA 46211 |||| Sbjct 7118 TATTA 7114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157644849700330