Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq54669 163 3e-35 seq11509 98.7 1e-15 >seq54669 Length=12211 Score = 163 bits (180), Expect = 3e-35 Identities = 305/441 (69%), Gaps = 14/441 (3%) Strand=Plus/Plus Query 146509 GGACTGAACAACGTGATGTAATCGTTTTTAATCAATCGTTCAATCATGAGGTCGTTAATT 146568 ||||| || | || || | |||||||| | || || | | ||| | | |||||| Sbjct 11778 GGACTAAATAGAGTTATCTCTTCGTTTTTTACTAAACGCTGATACATAAATTTATTAATT 11837 Query 146569 TGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACCTTTATTGTTCTTCAGT 146628 || || || ||||| | ||||||| ||| || || |||||||| || || || | | Sbjct 11838 TGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTTATTTTTTAAT 11897 Query 146629 ACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAATACAAAGTAGCTGCACCGCCA 146688 || | ||| ||||||| || | |||||| | ||| || | || || |||||||| ||| Sbjct 11898 ACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGCTGCACCACCA 11957 Query 146689 CGAATGCCGCCTTGAGAACAAGATTTAACAGAAG-CT--AAGTGAGTTTTCCAGAATGGA 146745 || | || ||||||||||||||||| || | || || ||||| ||| | || ||| Sbjct 11958 CGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTG---TTTATAAAACGGA 12014 Query 146746 ATAACGCCTGTATGACGAACTTCACCAGCGCCAATCTTAGAACCTTCAGCAC-GATACAT 146804 ||| || |||||| | |||||||| | ||| | ||||| |||| ||| | Sbjct 12015 ATACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACGGATGC-G 12073 Query 146805 TCCAGCATTAACACCAATACCGGCACGTTTGCTGATATATTTGATGATTGCTTTGTTTAC 146864 |||||||||| |||||| || || || | | |||||| |||||||| | || | Sbjct 12074 ACCAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGC---GCTTGC 12130 Query 146865 T---GCGTTAATACTGTCAAGACTATCGCCACCTTCAATAACAACGCAAGAACTGAACTG 146921 | || || ||| || | ||| || |||| ||| || | || ||||| || || || Sbjct 12131 TGTGGCATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAAATTG 12190 Query 146922 GCGAGTCGGAGTACGTACACC 146942 ||| || || ||||||||||| Sbjct 12191 GCGGGTAGGCGTACGTACACC 12211 >seq11509 Length=51200 Score = 98.7 bits (108), Expect = 1e-15 Identities = 73/84 (87%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 74897 TAAT-TTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCT 74955 |||| |||||||||| | ||||||| ||||||| |||| | ||||||||||||| |||| Sbjct 32009 TAATATTGGTGGCCCCTGCTGGATTCGAACCAGCGACCCAGCGATTATGAGTCGCTTGCT 31950 Query 74956 CTAACCATCTGAGCTAAAGGGCCT 74979 ||||||| ||||||||| |||||| Sbjct 31949 CTAACCAACTGAGCTAAGGGGCCT 31926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539680428427800