Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq17432 100 2e-16 >seq17432 Length=31749 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 ||||||||||| || || ||||| || || || |||||||||||| || ||| || Sbjct 23743 AAAATGCAAATTTTCGTGAAAACGTTGACCGGAAAAACCATTACCCTTGAGGTGGAGCCC 23802 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | | ||| || || ||||||||||| | || || Sbjct 23803 TCCGACACCATTGAGAACGTGAAGGCCAAGATTCAGGACAAAGAGGGCATCCCTCCCGAC 23862 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||||||||| |||||||||||||||||| | ||||| ||| | ||||||| Sbjct 23863 CAACAGAGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGCACTCTCTCCGATTAC 23922 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 ||||||||||| || || || || || ||||| Sbjct 23923 AACATTCAAAAGGAGTCAACCCTTCATTTGGTA 23955 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| ||||| || || || | || || || || ||||| ||| ||| || || Sbjct 24137 AATGCAGATATTCGTCAAGACTCTGACCGGAAAGACAATTACTTTGGAAGTGGAGCCGTC 24196 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | | ||| |||||| |||||||| || | || ||||| Sbjct 24197 GGACACCATTGAGAACGTAAAGGCCAAAATCCAAGACAAAGAAGGTATTCCTCCGGATCA 24256 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGA--TTCTAAAACTATGGCCGATTAT 28730 ||||||||| |||||||||||||||||| | ||||| | || ||| | | |||||| Sbjct 24257 ACAGAGACTGATCTTTGCGGGCAAACAACTAGAAGACGGCCGAACACTCT--CTGATTAT 24314 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 || |||||||| || || ||||| || ||||| Sbjct 24315 AATATTCAAAAGGAGTCGACTCTTCATTTGGTA 24347 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||||||||| || |||||||| || || || ||||| || ||| ||| || || Sbjct 24593 AATGCAAATATTCGTCAAAACATTGACCGGAAAGACCATCACTTTGGAAGTGGAGCCGTC 24652 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | | ||| ||||| ||||||||||| | || ||||| Sbjct 24653 GGACACCATTGAGAACGTGAAGGCGAAAATTCAGGACAAAGAGGGTATTCCTCCGGATCA 24712 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGA--TTCTAAAACTATGGCCGATTAT 28730 |||| | |||||||| || ||||||||| | ||||| | || ||| | | || ||| Sbjct 24713 ACAGCGTCTTATCTTCGCCGGCAAACAACTAGAAGACGGCCGAACACTCT--CTGACTAT 24770 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 || |||||||| || || ||||| || ||||| Sbjct 24771 AATATTCAAAAGGAGTCGACTCTTCATTTGGTA 24803 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| || || | || || |||||||| ||| || ||| || || Sbjct 24365 AATGCAAATCTTTGTTAAGACTCTGACCGGAAAAACCATAACCCTTGAGGTGGAGCCCTC 24424 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | | ||| |||||| || ||||| || | || || || Sbjct 24425 CGACACCATTGAGAACGTTAAGGCCAAAATCCAAGATAAAGAAGGCATCCCTCCCGACCA 24484 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||||| ||||| || |||||||| |||||||| ||| | |||||||||| Sbjct 24485 ACAAAGACTGATCTTCGCCGGCAAACAGTTGGAAGACGGGCGCACTCTTTCCGATTATAA 24544 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||| || || || || || ||||| | | || ||||||| || Sbjct 24545 CATTCAAAAGGAGTCGACCCTTCATTTGGTACTCCGTTTGAGAGGAGGAAT 24595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425112672529755