Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_020484.1 Length=147284 Score E Sequences producing significant alignments: (Bits) Value seq54669 91.5 1e-13 >seq54669 Length=12211 Score = 91.5 bits (100), Expect = 1e-13 Identities = 242/367 (66%), Gaps = 2/367 (1%) Strand=Plus/Minus Query 119987 ATATGTTGCTCAAAGGGCTGGCATTGGTATCAATGCTGGCAGAATTAGGGGAATTAATAG 120046 ||||||| | || | || || |||||||| |||||||| | || | | ||| Sbjct 12113 ATATGTTTCGCAGCGCGCGGGGATTGGTATTAATGCTGGTCGCATCCGTGCGCAAGGTAG 12054 Query 120047 TCGTATCCGTGGCGGAGAAGTTCAACATACCGGCGTTGTCCCATTTCTTAAAAAGTTTGA 120106 | | || ||| || |||| | |||||||| | | || ||| |||| | ||| | Sbjct 12053 TGGAATTCGTCATGGTGAAGCTTTTCATACCGGTTGTATTCCGTTTTATAAACACTTTCA 11994 Query 120107 GGCAACGGTCAAGTGTTGTACACAAAACGGTGTTAGAGGCGGTTCAGCAACTGTACACTT 120166 | | |||| || | |||| | ||| ||||| | || ||| ||||||| || || Sbjct 11993 GACTGCGGTAAAATCTTGTTCTCAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTTTT 11934 Query 120167 TCCTATTTGGCACCAAGAAATAGAAGATATACTTGTTTTAAAAAACAATAAAGGTACGGA 120226 ||| | ||||| ||| |||||| || | | || |||||||| || ||| || Sbjct 11933 TCCCCTGTGGCATTTAGAGATAGAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTTGA 11874 Query 120227 AGATAATAGAGTTAGAAAATTAGATTACTCTATACAA-TTATCAAAATTATTTTACGAAA 120285 ||||||| | ||| | | | |||||| ||||| ||| ||| |||| | | | Sbjct 11873 AGATAATCGTGTTCGCCATATGGATTACGGGGTACAAATTAATAAATTTATGTATC-AGC 11815 Query 120286 GATTTATTAAGAATGAAGATATAACTTTATTCTCTCCACATGATGTGCCAGGTTTATATG 120345 | || | || || ||||| |||||| |||| |||| ||| || || |||||||||| Sbjct 11814 GTTTAGTAAAAAACGAAGAGATAACTCTATTTAGTCCATCTGACGTTCCGGGTTTATATG 11755 Query 120346 ACGCATT 120352 | || || Sbjct 11754 AAGCTTT 11748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470848941472800