Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2342 129 2e-24 seq1020 89.7 2e-12 >seq2342 Length=5817 Score = 129 bits (142), Expect = 2e-24 Identities = 197/274 (72%), Gaps = 10/274 (4%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||||| | || |||||||||||||| ||| | || |||||||| ||| Sbjct 2726 TCCATAGCTTTGATGAGTCGTCGCTGAATATAACCGGTTTCGGCAGTCTTTACAGCCGTA 2785 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGCC 302692 || || ||||| | ||||||||||| | |||||||| | ||| ||| || | || Sbjct 2786 TCGATGAGACCTTCGCGACCACCCATTGAGTGGAAGAAGAACTCAGATGGT-GTCAAACC 2844 Query 302693 CCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGG 302749 | |||| | | ||| |||||||||||||||| | || || || ||||||| || Sbjct 2845 CGCCAA-ATATGAGTTCTCAACGAAACCACGTGATTCCGGTCCGTAATCGTC---TTTAA 2900 Query 302750 TAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCT 302809 | || || || || || || || | ||| |||| ||||||||||| || ||||||| Sbjct 2901 TGAAATGGGGAAGAGTTCTCTTTCGGAATCCGAATGGTATACGCTTTCCCTCGACGTTCT 2960 Query 302810 GCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||||||| | || | ||||| || || ||||| Sbjct 2961 GCTGTCCGACACAAGCAATCACTTGAGAGATATT 2994 >seq1020 Length=34902 Score = 89.7 bits (98), Expect = 2e-12 Identities = 211/310 (68%), Gaps = 14/310 (5%) Strand=Plus/Plus Query 251422 TTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACC-CTTGGTGAAGCG 251480 ||||| | |||||||| || | |||||| | || | || || | ||| | ||| | Sbjct 679 TTACAGATATGGACGCGATAGGGATCAGACACTTCGAACAGACGTTCTCTTAG-GAACTG 737 Query 251481 AGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATC 251540 | || ||||| || ||| ||| || || |||||||||||||| ||||| |||||||| Sbjct 738 TGCCGCGCCGTGAGATATCTGACAGTCCCGTTCCATTTCACCGAATCGAAGGCCACCATC 797 Query 251541 GCGAGCCCTACCCTC----GGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGC 251596 | || || ||||| ||| | ||||| ||| | | ||| || || | | | Sbjct 798 TCTGGCTCTGCCCTCCATTGGCTGTCTGACCAGT-ATCTGAAC---GGGTCCTCTCGCAC 853 Query 251597 GGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGA 251656 || ||| |||||| | |||||||| ||||| |||||||| | | ||| || || | Sbjct 854 GGGAATGGATCTTATCGTCGACCATATGTTTGAGGCGCTGGTAATACGTGGGGCCAATAA 913 Query 251657 AGATGCTCGAAGGC--ATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATT 251714 | || || || || | || ||| || | ||||||||||||||||| | ||| | Sbjct 914 ATAT-CT-GAGCGCTGACTTTACGTCCTGTGTGTGCGTTATACATAACTTCATATCCTCT 971 Query 251715 AGATTCATAA 251724 ||| |||| Sbjct 972 CAATTGATAA 981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470755064978265