Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq54669 203 4e-47 >seq54669 Length=12211 Score = 203 bits (224), Expect = 4e-47 Identities = 343/494 (69%), Gaps = 12/494 (2%) Strand=Plus/Minus Query 41672 GGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCA 41731 ||||| ||||| ||||| || || ||| | ||| ||| |||| |||| || || Sbjct 12211 GGTGTACGTACGCCTACCCGCCAATTTAGCTCTTGTGTATTGATAGAATGTGGGGACAGT 12152 Query 41732 CTGGGTTCTCTGAATGCTGTAACCTCTGCGATCGTGAAGTATATTTCACAACGTGCTGGT 41791 ||| |||| | ||||| | | || ||| | || ||| |||| || || || || Sbjct 12151 TTGGATTCTATCAATGCCACAGCAAGCGCAATCATAAAATATGTTTCGCAGCGCGCGGGG 12092 Query 41792 ATCGGTGTAAACGCCGGACATATTCGCGCGATGGGTTCTAAAATCCGTGGTGGTGAAGCA 41851 || ||| | || || || | || || ||| ||| | ||| ||| ||||||||| Sbjct 12091 ATTGGTATTAATGCTGGTCGCATCCGTGCGCAAGGTAGTGGAATTCGTCATGGTGAAGCT 12032 Query 41852 GTTCATACAGGCGTGATCCCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTTCA 41911 ||||||| || || ||||| | ||||| ||||||| ||||| ||||| ||||| Sbjct 12031 TTTCATACCGGTTGTATTCCGTTTTATAAACACTTTCAGACTGCGGTAAAATCTTGTTCT 11972 Query 41912 CAAGGTGGTGTTCGTGGTGGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTT 41971 ||||| ||||| ||||||||||| |||||||| | || ||| | |||||||| || | Sbjct 11971 CAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTTTTTCCCCTGTGGCATTTAGAGATA 11912 Query 41972 GAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGAAAACAACCGTATCCGTCACCTG 42031 ||||| ||| |||| | ||||| ||| ||||||||| | || ||| | || || || Sbjct 11911 GAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTTGAAGATAATCGTGTTCGCCATATG 11852 Query 42032 GATTATGGCGTACAGCTTAACGATTTGATGTATAAACGTTTGATGAATAACGATTACATC 42091 ||||| || ||||| |||| | || |||||| | ||||| | || ||||| | || Sbjct 11851 GATTACGGGGTACAAATTAATAAATTTATGTATCAGCGTTTAGTAAAAAACGAAGAGATA 11792 Query 42092 ACTCTGTTCAGCCCTGATGTTGCTAACGATC---GTCTGTATGATGCGTTCTATCAAGCG 42148 ||||| || || || || || ||| || || | ||||| || |||| | || Sbjct 11791 ACTCTATTTAGTCC--AT----CTGACGTTCCGGGTTTATATGAAGCTTTCTTT---GCT 11741 Query 42149 GATCAGACTGAATT 42162 ||||| | |||||| Sbjct 11740 GATCAAAATGAATT 11727 Score = 93.3 bits (102), Expect = 5e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 43412 CAAAAACACAGTGTATTTGAAAAGCTGACTGAAAAACAACTGTCATTCTTCTGGCGACCG 43471 |||||||| | | |||||||| ||| ||||||||| || || || || ||||| ||| Sbjct 10360 CAAAAACATATCATGTTTGAAAAATTGATTGAAAAACAGCTTTCCTTTTTTTGGCGGCCG 10301 Query 43472 GAAGAAGTGGATCTGTCGATTGACCGTATGCAGTATGCGAAAATGCCGGAACATGAAAAA 43531 ||||| | ||| | | ||| | || | ||||| | || || ||||||||| Sbjct 10300 GAAGAGATTGATGTTGCACGTGATAGAATCGACTATGCTGCTTTACCTGAGCATGAAAAA 10241 Query 43532 ATCATTTTCGATTCTAACCTGCAATATCAAACCCTACTGGATACCATTCAGGGACGCGGC 43591 | ||||| | ||| | ||||||||||||| | ||| | || ||||||||| || Sbjct 10240 AATATTTTTATTAGTAATTTAAAATATCAAACCCTGTTAGATTCAATCCAGGGACGCAGC 10181 Query 43592 CCTAACCTTGCATT 43605 |||||| |||| || Sbjct 10180 CCTAACATTGCTTT 10167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563401309739400