Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq13154 122 3e-23 >seq13154 Length=83798 Score = 122 bits (134), Expect = 3e-23 Identities = 218/315 (69%), Gaps = 4/315 (1%) Strand=Plus/Minus Query 33199 TTGGGCACTCTCGGACAAGACCCGGAAGTTAAATATATGCCTTCTGGCGGCGCTGTGTGC 33258 ||||| ||| | || || || || ||| || |||||||| || || ||||| | Sbjct 29608 TTGGGAACT-TAGGTCAGGATCCAGAAATTCGTTATATGCCAAACGGGGGGGCTGTTGCC 29550 Query 33259 AATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATAAAGCAACAGGGGAAAAGAAAGAG 33318 || | ||| ||||||| | || ||| ||||||| ||| || ||| || ||| Sbjct 29549 AACATCTCTGTGGCAACGACTGAAAGCTGGCGCGATAAACAAACTGGCGAACCAAAGGAG 29490 Query 33319 CAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGCTGGCAGAGGTGGCTGGCGAATAC 33378 |||||||||||||||| || ||| | ||||| || | || || ||||| ||||| Sbjct 29489 AAGACAGAATGGCATCGTGTCGTTTTGTTCGGTAAAATAGCTGAAGTGGCAAAAGAATAT 29430 Query 33379 CTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAAATTACGTACTCGCAAATGGACAGAT 33438 |||| || || || ||||| ||| | ||||| | |||| || ||||||||| |||| Sbjct 29429 TTGCGAAAGGGATCGCAGGTTTATATCGAAGGGACCTTACAAACACGCAAATGGCAAGAT 29370 Query 33439 CAAAGCGGTGTTGAAAAATACACTACTGAAATCGTCTTGCAGCCTATGAACGGCGTTATG 33498 |||| |||| || ||||| |||||| | ||| | || ||| || ||| ||| Sbjct 29369 CAAAACGGTCAGGATCGCTACACAACTGAAGTGGTCGT-CAATCTAGGA--GGCACCATG 29313 Query 33499 CAAATGATTGGTGGT 33513 |||||| | || ||| Sbjct 29312 CAAATGCTAGGGGGT 29298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151943067299460