Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq55467 500 2e-137 seq55492 302 1e-77 seq54837 208 2e-49 seq55042 147 6e-31 seq36486 141 2e-29 seq56058 127 5e-25 >seq55467 Length=2484 Score = 500 bits (554), Expect = 2e-137 Identities = 809/1151 (70%), Gaps = 17/1151 (1%) Strand=Plus/Plus Query 1146 AGGTTAACGCCTCAAACATGAACCGTCCGGAGGATGGCGCGCGGTTTGAACCGCTGATCG 1205 ||||||| ||||| ||||| |||||||| ||||| || || || || || || || | Sbjct 1 AGGTTAATGCCTCCAACATAAACCGTCCCATCGATGGGGCCCGTTTCGAGCCACTAATTG 60 Query 1206 GTAACCCCGGTGATGGTTCATCACCCCACTGTGCGGTGGTGGATGAATATCACGAGCATG 1265 | |||||||| ||||| | || || || ||| | | ||||||| || || || | Sbjct 61 GCAACCCCGGCGATGGGGCTTCTCCTCATCTTGCCATTATCGATGAATTCCATGAACACG 120 Query 1266 CCAC---CGATGCGCTTTATACCACAATGCTTACCGGGATGGGGGCGCGACGTCAGCCAC 1322 | | || |||||| ||||||| | ||||| ||||| || || | || || | Sbjct 121 AAAATAGCAAT---CTTTATCACACAATGTTGACCGGTATGGGCGCCCGGCAGCAACCGC 177 Query 1323 TGATGTGGGCCATCACCACCGCCGGGTACAACATTGAGGGGCCGTGCTACGACAAACGGC 1382 | || ||| | || || ||||| | |||| || || || || || ||||| || | Sbjct 178 TTATCTGGAGTGTGACGACAGCCGGTAATGACATCGAAGGTCCCTGTTATGACAAGCGCC 237 Query 1383 GGGAAGTCATCGAGATGCTCAACGGCTCGGTGCCTAACGATGAACTGTTCGGGATCATCT 1442 |||||||||| || ||||| | | ||||| ||||| ||| | || ||| | || | Sbjct 238 GGGAAGTCATTGATATGCTAACCCAGGTAGTGCCCAACGACGAATTATTTGGGTTAATTT 297 Query 1443 ATACCGTTGATGAAGGTGACGACTGGACCGACCCGCAGGTGCTGGAAAAAGCCAATCCAA 1502 | ||| | ||||| || || || |||||| | || | || ||||||||||| | Sbjct 298 ACACCCTCGATGAGGGAGAGGATTGGACCCAGCCAGCCGCCCTCAGCAAAGCCAATCCCA 357 Query 1503 ATATTGGCGTGTCGGTTTATCGCGAATTTTTGTTAATTCAGCAGCAGCGTGCGAAAAATA 1562 | || ||||| || |||| | || ||| || ||| || || || || || | || | Sbjct 358 ACATGGGCGTCTCTATTTACCCTGATTTTCTGCTAAGCCAACAACAACGAGCCATCAACA 417 Query 1563 ACGCCGGTCTGGCAAACGTCTTTAAAACAAAACACCTCAATATCTGGGTGTCGGCGCGTT 1622 | ||| | | || |||| ||||||||| ||||||||||||||||||||||| || |||| Sbjct 418 ATGCCAGACAAGCCAACGCCTTTAAAACCAAACACCTCAATATCTGGGTGTCAGCACGTT 477 Query 1623 CGGCGTATTTCAACCTGGTGAGCTGGCAGAGCT-GCGAGGATAAATCACTGACTCTTGAG 1681 |||| | |||||| |||||| ||||| | ||| | || || | |||||| | || Sbjct 478 CGGCTTTCTTCAACATGGTGAACTGGC-GCGCTTGTGAAGACACCAGCCTGACTTTGGAT 536 Query 1682 CAGTTCGAGGGGCAGCCGTGCATTCTGGCCTTTGACCTGGCGCGTAAGCTGGATATGAAC 1741 || ||||| || || | || | | | ||||| ||||||| ||||| |||||||| Sbjct 537 CAATTCGAAGGACAAGCCTGTTATTTAGGGTTTGATTTGGCGCGCAAGCTAGATATGAAT 596 Query 1742 AGCATGGCGCGACTTTATACCCGCGAGATTGACGGTAAAACG-CATTACTACAGTGTGGC 1800 |||||||| || | | || ||| |||||| |||| |||||| ||||| |||||| | || Sbjct 597 AGCATGGCCCGCGTGTTTATCCGTGAGATTAACGG-AAAACGTCATTATTACAGTATTGC 655 Query 1801 CCCGCGTTTCTGGGTACCGTATGACACGGTGTATAGCGTCGAGAAAAATGAAGATCGCCG 1860 ||| | |||||||| || || |||| ||||| || | || | || || ||| || Sbjct 656 CCCTAGGTTCTGGGTGCCTTACGACAGCGTGTACAGTGCAGATACCAACGA---TCGTCG 712 Query 1861 GACAGCCGAACGCTTTCAGAAATGGGTGGAAATGGGCGTTCTGACCGTTACCGATGGTGC 1920 ||||| ||||| ||||| || ||||| | ||| | || | || ||||| || || Sbjct 713 CACAGCGGAACGATTTCAAAAGTGGGTCAATATGCACCAGCTAATCGCGACCGACGGGGC 772 Query 1921 AGAGGTGGATTATCGCTACATCCTCGAAGAGGCCAAAGCGGCGAACAAAATCAGCCCGGT 1980 ||| || || || || || ||||||||||| || || || || ||| | | |||||| Sbjct 773 AGAAGTTGACTACCGGTATATCCTCGAAGAAGCAAAGGCCGCTAACTGTCTTAACCCGGT 832 Query 1981 CAGTG-AGTCACCCATCGACCCTTTCGGAGCGACCGGGCTGTCACATGACCTTGCTGATG 2039 | ||| | ||| | ||||| ||| || || || || ||| ||| | | || || | Sbjct 833 C-GTGCAATCAGCGATCGATCCTCATGGCGCCACTGGCCTGAGTCATCAGTTGGCCGACG 891 Query 2040 AAGACCTGAATCCCGTTACTATCGTCCAGAACTTCGCCAATATGTCCGACCCGATGAAAG 2099 | | || || || || || || |||| || | | | ||||||| || | ||||||| Sbjct 892 AGCAACTTAACCCTGTCACCATTATCCAAAATTACACGCATATGTCAGATGCCATGAAAG 951 Query 2100 AGCTGGAGGCAGCGATTGAATCGGGACGCTTTCATCATGACGGCAATCCCATCATGACCT 2159 | |||| || || |||||||| || |||||||| || || || | ||||||||||||| Sbjct 952 AATTGGAAGCCGCCATTGAATCTGGCCGCTTTCACCACGATGGTCACCCCATCATGACCT 1011 Query 2160 GGTGTATCGGCAATGTGGTCGGCAAAAACATGCCAGGTAACGATGATTTAGTGAAGCCCG 2219 |||| ||| |||| ||||| || ||| | |||| ||||||||||| | || ||||| Sbjct 1012 GGTGCATCAGCAACGTGGTGGGTAAACATGTGCCGGGTAACGATGACATTGT-TCGCCCG 1070 Query 2220 -TCAAAGAGCAGGCGGAAAACAAAATCGATGGTGCAGTTGCGCTGATTATGGCGGTTGGC 2278 | ||||| |||| ||||||||||| || || || || || | || ||||| ||||| Sbjct 1071 ATAAAAGAACAGGAAGAAAACAAAATTGACGGCGCCGTCGCATTAATCATGGCAGTTGGT 1130 Query 2279 AGAGCCATGCT 2289 | || ||||| Sbjct 1131 CGGGCAATGCT 1141 >seq55492 Length=1043 Score = 302 bits (334), Expect = 1e-77 Identities = 330/436 (76%), Gaps = 2/436 (0%) Strand=Plus/Plus Query 630 CTTACCCCAACGTAAATGCTGCCAATCAGTATGCCCGTGATGTCGTGCGCGGAAAGATTG 689 ||||||| ||||| | || | |||||| |||||||| || || ||||| ||| Sbjct 609 CTTACCCTAACGTCGCGTCGGCTACTCAGTACGCCCGTGAGGTGACCCGAGGAAAAATTA 668 Query 690 TGGCCTGCCAGTTTGTGATTCAGGCCTGCCAGCGCCATCTTGATGACCTGATGGCGGAAA 749 | ||||||| | |||||| ||||||| || || ||||| || || | |||| |||| Sbjct 669 TTGCCTGCCGCTATGTGATCGAGGCCTGTCAACGTCATCTAGACGATTTAGTGGCTGAAA 728 Query 750 AAAGTAAGTCGTTTCG-TTACCGCTTCGACAAAGACCTGGCTGAACGGGCCGCGAAATTT 808 || | ||| | |||| ||| || ||||||||||| | |||||||| ||||| |||||| Sbjct 729 AAGG-AAGCCAATTCGCTTATCGTTTCGACAAAGATCAAGCTGAACGCGCCGCAAAATTT 787 Query 809 ATTCAGCTGTTGCCACACACCAAGGGGGAGTGGGCATTCAAACGGATGCCCATCACGCTG 868 || || ||||||| |||||||| ||||| ||||| || ||||| | |||||| | Sbjct 788 ATCCAAATGTTGCCTCACACCAAAGGGGAATGGGCGTTTAAACGACAACTCATCACATTA 847 Query 869 GAGCCGTGGCAGCTCTTTGTGATCTGCTGCGCGTTTGGCTGGGTCAATAAAGGCTCCCGG 928 | || ||||||| ||| | |||||||| | ||||| ||| | |||||| |||| Sbjct 848 GCACCCTGGCAGCGTTTTATTATCTGCTGTGTCTTTGGTTGGATGCGAAAAGGCACCCGA 907 Query 929 CTGCGCCGCTTCCGTGAGGTGTATACCGAAATCCCCCGTAAGAACGGCAAATCGGCAATC 988 ||||||| |||||||| ||||| || ||||| || ||||| ||||| ||||| || ||| Sbjct 908 TTGCGCCGGTTCCGTGAAGTGTACACGGAAATTCCTCGTAAAAACGGTAAATCAGCGATC 967 Query 989 TCTGCCGGTGTCGCCCTGTATTGTTTTGCCTGTGATAACGAGTTTGGCGCGGAAGTGTAT 1048 | |||||||||||| ||| ||||||| | |||||| |||| || ||||| ||||| ||| Sbjct 968 GCAGCCGGTGTCGCCTTGTTTTGTTTTTCTTGTGATGACGAATTCGGCGCTGAAGTCTAT 1027 Query 1049 TCCGGTGCCACGACAG 1064 ||||| || || |||| Sbjct 1028 TCCGGCGCTACAACAG 1043 >seq54837 Length=669 Score = 208 bits (230), Expect = 2e-49 Identities = 444/658 (67%), Gaps = 10/658 (2%) Strand=Plus/Minus Query 8477 GATGAGCCGTTTGATTATATCGGTCTGCCGTTCAACGACACGGCCTCCGTTAACACGC-- 8534 ||||| |||||||| ||| | | | || || || ||| ||| || ||| || || Sbjct 667 GATGAATTGTTTGATTTTATTGCTTTCCCTTTTAATGACCTGGCTTCA-TTATCAAGCAT 609 Query 8535 TGGTGACCGAGATGAACGATACCAGCGGTCGCTGGAGCTATGCGCGTCAGCTGTATGGTC 8594 ||| | |||||||||||||||| ||| || ||||||| || |||||||||||||| | Sbjct 608 TGGCGTT-GAGATGAACGATACCACCGGGCGATGGAGCTGGGCACGTCAGCTGTATGGGC 550 Query 8595 ATGTGTATACGGCAAAGACCGGCACACTGTCAGAACTGGTG---AACGCAGGTGACCAGT 8651 |||||||||| |||||| || | ||| || || ||| | | | ||| || Sbjct 549 ATGTGTATACCGCAAAGTTGGGGAAACTCTCCGATCTGTTTGCTATCAGCGGTAGCC--- 493 Query 8652 TTAACCAGCAGCACATCACCCTGGCGGGGTACGAAAAAGAGACCCAGACGCCTGCCGACG 8711 | || | | || |||| | || || ||| | | || | | | || || | Sbjct 492 TCAATGACCCCCATGTCACGGTCTGTGGCTATGAACCTGCTATTCAAATGGCGGCTGATG 433 Query 8712 AGCTGGCGGCAAGCCGTACCGCCCGCGCAGCGGTGTTTATCCGCAACGATCCGGCACGTC 8771 | | |||| || |||||| | || | ||||| ||||||||||| || | | Sbjct 432 AATTAACGGCGCTACGGACCGCCAGAAACGCCCTCTTTATTCGCAACGATCCCGCCAGAC 373 Query 8772 CCACGCAGACCGGTGAGCTGGTGGGTATGCTGCCTGCGCCGAAGGGGAAACGGTTCACGA 8831 | ||| || || ||| || | || || | |||| |||| || || Sbjct 372 CGGTGCAAACTGGCCTGCTCAATGGCGCTTTACCCGCCCGTCCGGGGCAACGTTTTACCT 313 Query 8832 TGACCGAGCAGCAGACCCTGCTGTCTCATGGCGTGGCAACGGCGTATGTCGAAAGCGGGG 8891 |||| || ||||| | ||| | | |||||| | || ||||| || || ||| ||||| Sbjct 312 TGACTGAACAGCAATCACTGTTAACCCATGGCATCGCCACGGCCTACGTAGAAGGCGGGC 253 Query 8892 TGCTGCGCATTCAGCGTGATGTCACCACGTACAGGAAAAATTCTTACGGGGTTGCGGATA 8951 |||||| ||||| ||||| ||||||| ||| ||||||| ||||||| ||| |||| Sbjct 252 AGCTGCGGATTCAACGTGAAATCACCACCTACCAGAAAAATGCTTACGGCAATGCTGATA 193 Query 8952 ACAGCTACCTCGACAGCGAGACGCTGCATACCAGTGCGTATGTACTGCGCAAACTGAAAT 9011 ||||||| || |||||||| || ||||||||||||| ||||| ||| | |||||| Sbjct 192 ACAGCTATCTGGACAGCGAAACCTTGCATACCAGTGCTTATGTGCTGAGACGCCTGAAAA 133 Query 9012 CCGTCATTACCAGTAAGTACGGGCGTCACAAGCTTGCCAGCGACGGTACCCGCTTTGGTC 9071 || || || || || || || ||||| | |||| ||||| || |||||||| | Sbjct 132 GTGTGATCACGAGCAAATATTCACGACACAAATTAGCCAATGACGGGACGCGCTTTGGGC 73 Query 9072 CCGGTCAGGCGATTGTCACCCCGGCGGTAATCAAAGGGGAACTGCTGGCAACCTACCG 9129 | || || || || |||||||| | || || || ||| || |||| |||||||| Sbjct 72 CAGGGCAAGCCATCGTCACCCCTGTCGTCATTCGTGGTGAATTGTTGGCCACCTACCG 15 >seq55042 Length=1078 Score = 147 bits (162), Expect = 6e-31 Identities = 232/330 (70%), Gaps = 2/330 (1%) Strand=Plus/Minus Query 9328 GGAACCTGTTATTTCAAAATTGACGGTCAGCAGCTATCGCTGACCGGCGGCATTGAGGTG 9387 || |||||||| |||||| | || || | ||| |||| ||||| || || ||||| || Sbjct 868 GGCACCTGTTACTTCAAAGTAGATGGGTATCAGTTATCTCTGACAGGGGGAATTGAAGTC 809 Query 9388 CCCATGAACAGGACGGTCAATGATGACATCATCGGCCTGGACGGTTCAGTGGACCGCAAG 9447 || ||||||| ||||| || || ||||||||||||| || || || ||| Sbjct 808 CCGATGAACACAGTGGTCAGAGAAGATATCATCGGCCTGGCAGGGGATGTAGATTACAAA 749 Query 9448 GAAACTCACCGTGCGCCTTATGTCAAAGGGACATTCAAGGTGCCGAAGAATTTTCCGGTG 9507 |||||| || | |||||| | | ||||| || || |||||||| | || || Sbjct 748 GAAACTTACAGGGCGCCTCACATAAAAGGAACGTTTAAGGTGCCAGCGCGCTTCCCTAAA 689 Query 9508 AGTAAAATCACCTCGTCTGATGAG-ATGACCATCACTGCCGAGCTGGCGAACGGTCAGGT 9566 |||||||| | || | || ||||||||||| || || ||||| ||| | ||| Sbjct 688 GATAAAATCATCAGCTC-AACCAGCATGACCATCACAGCAGAACTGGCAAACAGCATGGT 630 Query 9567 CTATGTATTGTCGTCCGCCTGGCTGCACGGAGAAGCGAACCATAATGCCGAAGAAGGCAC 9626 || || || || || |||||||| || |||||||| ||||||||||||||| | Sbjct 629 TTACGTCTTATCAGGGGCTTGGCTGCATGGTGAAGCGAATGTTAATGCCGAAGAAGGAAA 570 Query 9627 GGTTGATCTTGAGTTCCACGGTGAAGAAGG 9656 || || || || || || ||||||||||| Sbjct 569 AGTGGAGCTGGAATTTCATGGTGAAGAAGG 540 >seq36486 Length=229 Score = 141 bits (156), Expect = 2e-29 Identities = 138/178 (78%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 10372 TACCCGGTACAACGGCTGATTTCCAGAACATGATGCAGATGCTGGTGCGTCAGGGGATCC 10431 ||||||| || || |||||||| || | |||||||| ||||| ||||| || ||||||| Sbjct 178 TACCCGGGACGACTGCTGATTTTCAACATATGATGCAAATGCTTGTGCGCCAAGGGATCC 119 Query 10432 CGGCAGAAAACATTCTGGGTGGTGTGGGTAAAGCGACAGCTTATCTTGCGGTACAACTGa 10491 | |||||||| || || ||||||| ||||| |||| ||||||||||| || || | Sbjct 118 CAGCAGAAAATATCCTTAACGGTGTGGCCAAAGCTTCAGCCTATCTTGCGGTGCAGCTCA 59 Query 10492 aaaaaaCACCGGAAGCGGCTGCTGAGTTTGCTGCAAAGATGCAGGATGCTACCGGAAC 10549 ||||| | || || || || || || ||||| ||||| ||||| ||||| || || || Sbjct 58 AAAAACCCCCTGAGGCCGCCGCAGAATTTGCAGCAAAAATGCAAGATGCGACAGGCAC 1 >seq56058 Length=267 Score = 127 bits (140), Expect = 5e-25 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 10560 GACATGATGGGGCTGTTCGACACTATCCAGAAGGCGTTTTATCTGGGCGTTGACGATACC 10619 |||||||||||| |||| || || |||||||| || |||||| | ||||| || |||| | Sbjct 256 GACATGATGGGGTTGTTTGATACCATCCAGAAAGCCTTTTATTTAGGCGTAGAGGATAGC 197 Query 10620 AACATGTTGTCCTTCTTCACTAAAACCAGTTCTGTTCTGAAGATGGTGAACAAGGACGGT 10679 | || | ||||||| | ||||||||| | | ||| ||||| ||||| || || Sbjct 196 CAGTTGCTTGCCTTCTTTAGCAAAACCAGTGCCATCATGACCATGGTCAACAAAGAGGGA 137 Query 10680 CTTCAGGCTGCACAGAGCCTT-GCCCCCATCAGCGTCATGATGGATCAGATGGGGATGAA 10738 | || || || | |||| | || || ||| |||||||||||| |||||||| ||| Sbjct 136 TTACAAGCCGCCC-GAGCAATAGCACCGATCGCCGTCATGATGGACCAGATGGGAATG-- 80 Query 10739 CGGGGAG--TCGGCAGGTAATGCACTGCGAAAAGTTATCCAGTCCGGATT 10786 ||||||| || ||||| ||||| |||| || || | ||| |||| || Sbjct 79 CGGGGAGAATCAGCAGGAAATGCGTTGCGTAAGGTCTTTCAGGCCGGCTT 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132509678824930