Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq54383 100 5e-15 seq9088 100 5e-15 >seq54383 Length=339 Score = 100 bits (110), Expect = 5e-15 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 1485493 CCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGG 1485552 ||||| ||||| ||||| | |||| ||| || ||| | || || || || || ||| Sbjct 3 CCCTCAGAGACCGCGTGTTTCGCCAATTCTCCCGGCAATAGGAGTCGGACAGCCGTTTGG 62 Query 1485553 ATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTG 1485612 ||||| || | ||| || | ||||||| | | |||| ||| ||| |||| Sbjct 63 ATCTCCCGAGAAGTGATGGTCGACCTCTTGTTATAGTGGGCCAAACGGGAGGCTTCGGCT 122 Query 1485613 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAG 1485672 |||| || |||| |||||||| || || ||||||||||| ||||| | || |||| Sbjct 123 GCGATTCGCTCGAAGATGTCGTTTACGAATGAGTTCATGATTGACATGGCCTTCGAGGAG 182 Query 1485673 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 ||||| |||||| || ||||| || | |||||| || Sbjct 183 ATGCCGGTGTCGGGATGGACCTGTTTTAACACCTTATA 220 >seq9088 Length=19251 Score = 100 bits (110), Expect = 5e-15 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 || |||||||| || || || ||||| ||||| ||||| | |||| ||| || ||| Sbjct 4141 TATTTGGTGACAGCTTTAGTGCCCTCAGAGACCGCGTGTTTCGCCAATTCTCCCGGCAGT 4082 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || || || || ||||||||||| || | | || || | ||||||| | Sbjct 4081 AGGAGTCGGACTGCAGTCTGGATCTCCCGAGAGGTTATGGTCGACCTCTTGTTATAATGA 4022 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||| ||| |||||| | |||| || |||| |||||||| || || |||||||| Sbjct 4021 GCCAAACGGGAGGCCTCCGCAGCGATTCGCTCGAAGATGTCGTTCACGAAAGAGTTCATA 3962 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706 || ||| | ||| |||||| || ||| || || ||||| || ||||||| Sbjct 3961 ATACTCATGGCTTTCGAGGAGATACCAGTGTCCGGATGGACCTGTTTTAGCACCT 3907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7910252725360455