Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq54669 316 4e-81 seq4872 98.7 2e-15 >seq54669 Length=12211 Score = 316 bits (350), Expect = 4e-81 Identities = 704/1052 (67%), Gaps = 11/1052 (1%) Strand=Plus/Minus Query 71307 TGAACCGATGTTCCTGGGTCAGTCGGTTAACGTCTCACGTTATGATCAGCAGAAGTACCC 71366 |||||||||||| | |||||| | || ||||||||||| | ||||||||| || | Sbjct 10409 TGAACCGATGTTTTTTGGTCAGCCAGTAAACGTCTCACGCTTTGATCAGCAAAAACATAT 10350 Query 71367 CGCGTTCGAAAAGCTGATTGAGAAACAACTTTCATTCTTCTGGCGACCTGAAGAGGTGGA 71426 | ||| ||||| ||||||| ||||| ||||| || || ||||| || |||||| | || Sbjct 10349 CATGTTTGAAAAATTGATTGAAAAACAGCTTTCCTTTTTTTGGCGGCCGGAAGAGATTGA 10290 Query 71427 TGTTTCGCAAGACCGTATCGACTTCCAGGGGTTGCCAGATCATGAAAAACACATCTTCGT 71486 |||| | | || | ||||||| | || || || ||||||||| | || || | Sbjct 10289 TGTTGCACGTGATAGAATCGACTATGCTGCTTTACCTGAGCATGAAAAAAATATTTTTAT 10230 Query 71487 TTCTAACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGGTCGTAGCCCGAACGTGGC 71546 | ||| | ||||| ||||||||| | || || || ||||| || ||||| ||| | || Sbjct 10229 TAGTAATTTAAAATATCAAACCCTGTTAGATTCAATCCAGGGACGCAGCCCTAACATTGC 10170 Query 71547 CTTGCTGCCGATCTGTTCTATCCCGGAACTCGAAACCTGGATTGAAACCTGGGCGTTCTC 71606 || | || | |||||| || ||||| ||||| ||| | || |||||| | || | Sbjct 10169 TTTATTACCATTAATTTCTATTCCTGAACTGGAAACTTGGGTGGAGACCTGGTCATTTTT 10110 Query 71607 TGAAACGATTCACTCGCGCTCATACACCCACATCATCCGTAATATCTTTACTGACCCCTC 71666 ||| || | || || || || || || || || || |||||||| | | || || || Sbjct 10109 TGAGACCTTACATTCTCGTTCTTATACGCATATTATTCGTAATATTGTCAACGATCCTTC 10050 Query 71667 CATCGTGTTTGATGACATCGTGACCAACGAACACATCAAAGCGCGTGCTGAGTCCGTCAC 71726 | || ||||| || || || || || || | ||| | || || || | | Sbjct 10049 GGTGGTATTTGAGGATATTGTCACTAATCAAGAAATCTTAAAACGGGCAAAGGATATTTC 9990 Query 71727 GGAGTATTACGACCAGCTGATCGAAATGACCATGTACCTCAACTTACTGGGTGAAGGTAC 71786 | || || || | ||||| || ||||| | || | ||| | || || ||| Sbjct 9989 TGCTTACTATGATCTTCTGATTGAGATGACTAATTATTATCATTTATTAGGAGAGGGTTG 9930 Query 71787 TCATGTAATCAATGGTAAGAAAG-TCGTGGTCTCGATGCGTGCTATCAAGCGTCTGGTCT 71845 ||| |||| |||||| |||| | | ||| | | | | | || | | | | Sbjct 9929 CCATCTAATAAATGGT-AGAACGATTACCGTCAGTTTACCTACATTAAAAAAGCAGCTGT 9871 Query 71846 ACCTGTGCATCGTGTCGGTCAACGTGTTGGAAGCCATCCGCTTCTATGTCTCGTTTGCCT 71905 | | || | || ||||| | || ||||| | ||||| ||||| ||||||| Sbjct 9870 ATTTATGTCTGATGAGTGTCAATGCATTAGAAGCTGTTCGCTTTTATGTGAGTTTTGCCT 9811 Query 71906 GCTCGTTTGCCTTTGCTGAACGCGAGCTGATGGAAGGCAACGCCAAGATCATTAAACTGA 71965 | |||||||| ||||||||||| || | |||||||| || || || || || || ||| Sbjct 9810 GTTCGTTTGCTTTTGCTGAACGTGAATTAATGGAAGGTAATGCTAAAATTATCAAGTTGA 9751 Query 71966 TCGCCCGTGATGAAGCCCTGCATCTGACCGGCACCCAGCACATGATCATGTTAATGAAGT 72025 |||| ||||||||||| || ||||| |||| || ||||| || | || ||| | Sbjct 9750 TCGCTCGTGATGAAGCGCTACATCTTGCCGGAACACAGCATATTTTATATTTGATGCGTT 9691 Query 72026 CCGGTGCTGACGATGCTGAGATGGCGGAAATCGTTAAAGAGTGTGAAGCAGAAACATACG 72085 |||| ||| ||| || |||| ||||| | | | | || || | || |||| Sbjct 9690 CCGGCAATGATGATTTAGAAATGGTAGAAATTGCTCATCATTGCCAACAACAATGTTACG 9631 Query 72086 CACTCTTTAAGGACGCTGCAGAGCAGGAGAAAGACTGGGCGAACTATCTATTCCAGGACG 72145 | || || ||| | ||||||||||| |||||| | ||| |||| | || | Sbjct 9630 ATTTATTCGTCTCGGCAGCACAACAGGAGAAAGATTGGGCGGAATATTTATTTCGCGATG 9571 Query 72146 GGTCGATGATCGGTCTGAACAAAGAGATCGTGTGCCAGTACATCGAATACATCACCAACA 72205 | || ||||| || ||||| ||||| || | || |||||||| |||||||| ||||| | Sbjct 9570 GTTCTATGATTGGACTGAATAAAGACATTCTTTGTCAGTACATTGAATACATTACCAATA 9511 Query 72206 TCCGTATTCGCGCCAT-CGGTTACGATGACATCTACGC--CGGTGTCAAAGCTAACCCAA 72262 ||||||| | || | ||||| | || | | || | || | |||||| | Sbjct 9510 TCCGTATGCAAGCTGTGGGGTTAGCAGCACCTTTTAGCATCCGTTT------TAACCCGA 9457 Query 72263 TCCCATGGATCAACTCCTGGTTGGTTTCTGACAACGTGCAAGTCGCTCCACAGGAAGTGG 72322 | || ||||| || ||||| | || || || ||||| ||||| || || || ||||| | Sbjct 9456 TTCCCTGGATAAATGCCTGGCTAGTATCCGATAACGTTCAAGTTGCGCCTCAAGAAGTAG 9397 Query 72323 AAGTAAGTTCTTATCTGGTCGGTCAGATAGAC 72354 | || |||||||| |||| || || || ||| Sbjct 9396 AGGTTAGTTCTTACTTGGTGGGACAAATTGAC 9365 >seq4872 Length=25388 Score = 98.7 bits (108), Expect = 2e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165194 TCTATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCA 165253 ||| ||||||||| |||||||| |||||||||||||||||| ||||||||||||| |||| Sbjct 1014 TCTGTAGTTCAGTTGGTAGAACGGCGGACTGTTAATCCGTATGTCGCTGGTTCGAGTCCA 1073 Query 165254 GCTAGACCAGCCAA 165267 || ||| |||||| Sbjct 1074 GCCAGAGGAGCCAA 1087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 866729921032800