Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq40599 95.1 1e-14 seq11509 91.5 2e-13 >seq40599 Length=28396 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 61351 GTGAAAGTGCGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACGAACG 61410 || || || || | ||| || || ||||| || ||| ||||| | ||| ||||| ||| Sbjct 4619 GTAAAGGTACGCGTAATCACATCTCGCTGCTGTTCTTTAGTTAATGAATTGAAACGGACG 4560 Query 61411 GCATAGCCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 61470 ||||||||||| || || || || ||||| ||||||| |||||||| | | || || Sbjct 4559 GCATAGCCAGACACTCGTATCGTAAGCTGTGGATATTCTTCTGGATTATCCATAGC--CT 4502 Query 61471 TC--TAAAGTTTCTTTAGACAGCACGTTCACGTTCAAATGCTGTCCACCTTCAAC 61523 || ||| | |||| | || || || | || ||||||||||| |||||||| Sbjct 4501 TCAGTAACATCTCTTGATTCATGACATTAAGATTTAAATGCTGTCCCCCTTCAAC 4447 >seq11509 Length=51200 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 74608 TTGGTGACCCCAGCAGGACTCGAACCTGCAACCTAGCGATTATGAGTCGCGTGCTCTAAC 74667 |||||| |||| || ||| ||||||| || ||| |||||||||||||||| ||||||||| Sbjct 32004 TTGGTGGCCCCTGCTGGATTCGAACCAGCGACCCAGCGATTATGAGTCGCTTGCTCTAAC 31945 Query 74668 CAATTGAGCTATAGGGCC 74685 ||| ||||||| ||||| Sbjct 31944 CAACTGAGCTAAGGGGCC 31927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553964760703200