Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_023568.1 Length=246964 Score E Sequences producing significant alignments: (Bits) Value seq54669 172 9e-38 >seq54669 Length=12211 Score = 172 bits (190), Expect = 9e-38 Identities = 301/436 (69%), Gaps = 4/436 (1%) Strand=Plus/Minus Query 78682 GGCGTTCGTACCCCGACACGCCAGTTTAGTTCGTGTGTTAAGATTGAATCAGGCGACTCT 78741 || || ||||| || || ||||| ||||| || ||||| ||| |||| || ||| | Sbjct 12211 GGTGTACGTACGCCTACCCGCCAATTTAGCTCTTGTGTATTGATAGAATGTGGGGACAGT 12152 Query 78742 TTGCATTCAATCAATGAAGTGGCTAAATCAATTGTAAGTTACATTAGTAAGCGTGCAGGT 78801 ||| |||| ||||||| || | |||| ||| || || |||| || || Sbjct 12151 TTGGATTCTATCAATGCCACAGCAAGCGCAATCATAAAATATGTTTCGCAGCGCGCGGGG 12092 Query 78802 ATCGGTGTTAACGGCGGTGCGATTCGTGCTGAAGGGGCAGTCG--TTCGTTCAGGTGAGA 78859 || ||| |||| | ||| || ||||| |||| ||| | ||||| ||||| Sbjct 12091 ATTGGTATTAATGCTGGTCGCATCCGTGCGCAAGGT--AGTGGAATTCGTCATGGTGAAG 12034 Query 78860 TTCGTCACACTGGTGTAATTCCATTCTGGAAACACTTTCAAACTGCGGTTAAATCGTGTT 78919 | ||| || ||| ||||| || | ||||||||||| |||||||| ||||| |||| Sbjct 12033 CTTTTCATACCGGTTGTATTCCGTTTTATAAACACTTTCAGACTGCGGTAAAATCTTGTT 11974 Query 78920 CTCAAGGTGGTGTACGTGGGGGTGCTGCGACTCTAACTTACCCGATTTGGCACTTAGAAG 78979 ||||||| ||||| ||||| ||||| || || || || || | ||||| ||||| Sbjct 11973 CTCAAGGAGGTGTGCGTGGTGGTGCAGCAACGTTATTTTTTCCCCTGTGGCATTTAGAGA 11914 Query 78980 TTGAAAAACTGTTAGTTCTGAAGAACAACAAAGGTGTTGAAGAAAACCGTATTCGTCATC 79039 | ||||| ||||| || | || || ||| ||||||||||| || ||| |||| ||| Sbjct 11913 TAGAAAATCTGTTGGTATTAAAAAATAACCGTGGTGTTGAAGATAATCGTGTTCGCCATA 11854 Query 79040 TTGACTACAGTGTATCAATCAGTCGATTGATGCTTGAGCGTCTTGTGAATAACGATTACA 79099 | || ||| | ||| ||| | | ||| ||| | ||||| | || || ||||| | | Sbjct 11853 TGGATTACGGGGTACAAATTAATAAATTTATGTATCAGCGTTTAGTAAAAAACGAAGAGA 11794 Query 79100 TCACGCTATTCAGTCC 79115 | || ||||| ||||| Sbjct 11793 TAACTCTATTTAGTCC 11778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 789600282688800