Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq54669 138 2e-27 >seq54669 Length=12211 Score = 138 bits (152), Expect = 2e-27 Identities = 261/384 (68%), Gaps = 0/384 (0%) Strand=Plus/Plus Query 32811 TTTATTGATTTGGATACCGTAGTCCAAGTGTCTGATTCGATTTTCTTCCACACCCTTGTT 32870 |||||| ||||| | ||||| |||| || | | ||||| ||||| ||||| ||| Sbjct 11828 TTTATTAATTTGTACCCCGTAATCCATATGGCGAACACGATTATCTTCAACACCACGGTT 11887 Query 32871 GTTCTTGAGCACAAGGATTTTTTCAACTTCAAGATGCCACATCGGATAATACAGAGTAGC 32930 || || | || | | ||||| | || | |||||||| ||| || | | || || Sbjct 11888 ATTTTTTAATACCAACAGATTTTCTATCTCTAAATGCCACAGGGGAAAAAATAACGTTGC 11947 Query 32931 AGCGCCACCACGTACACCGCCCTGTGAGCAGCTTTTTACCGCAGTCTGAAAGTATTTCCA 32990 || |||||||| ||||| || || || || |||||||||||||||||||| ||| | Sbjct 11948 TGCACCACCACGCACACCTCCTTGAGAACAAGATTTTACCGCAGTCTGAAAGTGTTTATA 12007 Query 32991 GAATGGGATAATACCAGTATGACGAACCTCGCCAGAACGAATTCTAGAGCCTTCAGCACG 33050 || || ||| ||| |||||| | | || ||| |||||||| | |||| ||||| Sbjct 12008 AAACGGAATACAACCGGTATGAAAAGCTTCACCATGACGAATTCCACTACCTTGCGCACG 12067 Query 33051 AATAGCACCACCATTGATACCGATACCAGCTCTCTTGCTGATATAGTCAACGATAGAACT 33110 || |||| |||| ||||| || || || | || | ||| | | ||| | || Sbjct 12068 GATGCGACCAGCATTAATACCAATCCCCGCGCGCTGCGAAACATATTTTATGATTGCGCT 12127 Query 33111 AGCGGTTGCGTTAATGCTATCGAGTTCATCACCACTTTCAATCTTGACGCATGAGCTAAA 33170 || || || || || ||| | || |||| ||| ||| || || |||||||| Sbjct 12128 TGCTGTGGCATTGATAGAATCCAAACTGTCCCCACATTCTATCAATACACAAGAGCTAAA 12187 Query 33171 CTGACGGGTCGGAGTACGAACACC 33194 || ||||| || ||||| ||||| Sbjct 12188 TTGGCGGGTAGGCGTACGTACACC 12211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709790933029200